Candidatus Pelagibacter giovannonii: E5R92_05300
Help
Entry
E5R92_05300 CDS
T06537
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00330
Arginine and proline metabolism
peg00480
Glutathione metabolism
peg01100
Metabolic pathways
peg01110
Biosynthesis of secondary metabolites
peg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
E5R92_05300
09106 Metabolism of other amino acids
00480 Glutathione metabolism
E5R92_05300
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
E5R92_05300
Enzymes [BR:
peg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
E5R92_05300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIZ21196
UniProt:
A0A6H1Q3B7
LinkDB
All DBs
Position
complement(966719..967897)
Genome browser
AA seq
392 aa
AA seq
DB search
MQKFKTVDELINQLKPEKPIYCIRKKSIHSASTYFRNKFSGKVLYAVKTNSHPEVLKTIV
ESGIENFDVASIQEIKDIRAISPDAKCSYMHTVKSRENIKEAYFNYNIKAFSLDTKDELI
KIIEATNQAKDLELFVRVAVSNEHAEIDLSKKFGALISEAIGLLRLTKQYAKKVGLSFHV
GSQCMHPISYSKGIADIGNIIRKTKIIPDYINIGGGFPAIYPDLVPQSLDSYFEEIKKGL
LNLKLEKLPKILCEPGRALVAESGSTIVRVNLKKKQKLYINDGTYGTLFDAGTPNIVYPS
RLIKNGKIISKKLTAFNFYGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQ
FNGFYSNEIYEVEDEPIMTLYGKESNKGILVA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatttaaaacagttgatgagcttataaatcaactaaaaccagaaaagcctatt
tattgtattaggaaaaaatcaatacattcagcttccacttattttagaaataaattttca
ggcaaagtgctatatgctgtcaaaaccaactcacatcctgaggttttaaaaacaatagta
gagagtgggatagaaaactttgatgtggcctctattcaagaaattaaagacataagagcg
atctccccagatgcaaaatgttcatatatgcatactgttaaaagtagagaaaatattaaa
gaggcttactttaattataatattaaagctttttctttagacactaaagatgaattgata
aagattatcgaagcaactaatcaagcaaaagaccttgagttatttgtaagagtagctgtt
tcaaatgaacatgctgaaatagatttatctaaaaaatttggagcattaatatctgaagca
attggtttgttaagattaacaaagcaatatgcaaaaaaagtagggttaagttttcatgta
gggtctcaatgtatgcatccaatttcttattcaaaaggaattgcagatattggaaatata
ataagaaaaacaaaaattattccagattatattaatattggtggtggatttcccgctata
tatccagatcttgtacctcaatctttggacagttattttgaagaaataaaaaaaggttta
ttaaacttaaaattggaaaaacttcctaaaatattatgtgaacccggaagggcattagtt
gctgaaagtggatcaacaatcgtacgagtaaatcttaaaaaaaaacaaaaactttatata
aatgatggaacgtatggaactctttttgatgctggtacaccaaacatagtttacccttct
cgattaattaaaaatggaaaaataatatcaaaaaaattaactgcttttaatttttatggg
cctacttgtgatagcatggactatatgaagggaccttttctacttccaaacaatattaag
gaaaatgattatattgaactaggtcagcttggggcctacggtctaacttttagaactcaa
tttaatggtttttattctaatgaaatttatgaagtggaagacgaacctataatgacgtta
tatggtaaagagagcaataaaggtatattagttgcttaa
DBGET
integrated database retrieval system