Candidatus Pelagibacter giovannonii: E5R92_05570
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Entry
E5R92_05570 CDS
T06537
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E5R92_05570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peg02000
]
E5R92_05570
Enzymes [BR:
peg01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
E5R92_05570
Transporters [BR:
peg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
E5R92_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_22
ABC_membrane_2
ABC_ATPase
AAA_30
AAA_16
AAA_17
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QIZ21249
UniProt:
A0A6H1Q579
LinkDB
All DBs
Position
complement(1021143..1022882)
Genome browser
AA seq
579 aa
AA seq
DB search
MKNSEIYKRLFKDYSKKYINKILISVFFGVLVAASTSAIAWLLDPAIKKIFVEKDQSLIV
IIPSLIIVAFTIKGFALYFAKAIMIRVAEEIKKMLQSQMVKSLIKADTQLIDQKHSGKFI
SNLTYDVSHITTLLSTAVLNLFKDSLTLFGLLFVMFYQNWKLSLIAIIMIPIAGIASKTL
GKRMGKVVTEAQEKSGFLNTHLIELFKNHKLVKIFQREEYESKRSDEHLNQLKDKNIKIN
TVYIRISPIMETLTGIMIAILIFYSGKLALKSEIEIGNFFSFLAAMMLAYQPVRSLSTIN
ITLNQGLSAANRILPIIDHKNKILDRENSKDINITNASIKFNKLNFKYNSNEENVLKNID
INIAGGKMTSLVGHSGSGKSTILNLIPRFYDAQSGDILIDNQSIYKVKIQSLRDKISLVS
QDTTLFDDTIKNNIKYAKDDVTDEEVISAAKFSYASEFIEQLPHKYETIIGENGVRLSGG
EKQRLSIARAMIKKSPIILLDEATSSLDSETESKIQDALKILTKDKTTIVIAHRLSTILS
SDQIYIIDSGNVVANGKHDELLNNSELYKNFYEKQIRKE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattcagaaatttataaaagactttttaaagattattcaaaaaaatatattaat
aaaatattaatatcagttttttttggagttcttgttgcagcaagtacctctgcaatagcc
tggcttttggatcctgctataaaaaaaatatttgttgaaaaagaccagtctttaatagtt
atcataccttcattaataattgtagcatttacaattaaaggttttgccctctattttgca
aaagcgattatgattagagttgcagaggagattaaaaaaatgctccaatcacaaatggta
aaatctttaattaaagcagatactcaattaattgaccaaaaacattctggaaaattcatc
tcaaacctgacatatgatgtaagtcatattacaacattgcttagtactgctgttttaaat
ttatttaaagatagcttaactctatttgggttgttatttgtgatgttttatcagaattgg
aaattatcattgattgcaataataatgattcctattgctggtatagcgtctaagaccctt
ggtaagagaatgggaaaagtcgttactgaagctcaagaaaaatcaggttttttaaacacg
cacttaattgaattatttaaaaaccacaaattagtaaaaatatttcaaagagaagaatat
gaaagcaaaagaagtgacgaacatttaaatcaattaaaagataaaaatattaaaataaat
acagtatatataagaatatctccaatcatggaaaccttaacgggaataatgattgcaatt
ttaatattctattcaggaaaattggctctaaagagcgaaattgaaataggtaattttttc
tcttttttagcagcaatgatgctcgcttatcaacctgttagatctttatcaacaatcaat
ataactttaaaccaagggttatcagcggctaatagaattctacctattattgatcataaa
aataaaattttagatcgtgaaaattctaaagacatcaacatcactaatgcatcaattaaa
tttaataaattaaactttaaatataattctaatgaagaaaatgtcttaaagaatattgat
attaatatagctggtggtaaaatgacatctttagttggacacagtggttctggaaaatca
acaattttaaacttaatacctagattttatgatgcacaatctggggatatcctgattgat
aatcaatctatatataaagtaaaaatacaatctttaagagataagatctcacttgtaagt
caagatacaactttgtttgatgatactataaaaaataatatcaaatatgcaaaagatgat
gttactgatgaagaggtaatttcagcagcaaaattttcatacgcaagtgaatttatagag
caattgccccacaagtatgagaccataataggtgaaaatggagttagactatctggtgga
gaaaaacaaagactatcaattgcaagagctatgatcaagaaaagtccaataattctttta
gatgaagcaacttcatcattagactctgaaactgaaagtaaaattcaagatgcattaaaa
atattaactaaagataagacaaccattgtaatagcccatagactatcaacaattttaagc
tctgatcaaatttatattattgattctgggaatgttgttgcaaacggcaaacatgacgaa
ttattaaataattcagaactttataaaaatttctatgagaaacaaattcgtaaagaataa
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