Candidatus Pelagibacter giovannonii: E5R92_06000
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Entry
E5R92_06000 CDS
T06537
Name
(GenBank) type II/IV secretion system protein
KO
K02652
type IV pilus assembly protein PilB
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
peg02044
]
E5R92_06000
02035 Bacterial motility proteins [BR:
peg02035
]
E5R92_06000
Secretion system [BR:
peg02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
E5R92_06000
Bacterial motility proteins [BR:
peg02035
]
Pilus system
Pilus assembly proteins
E5R92_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
AAA_11
AAA_23
AAA_29
AAA_25
ABC_tran
nSTAND3
Rad17
AAA_14
AAA_30
Toprim_4
Viral_helicase1
DUF87
AAA_7
AAA_19
FtsK_SpoIIIE
DUF5073
Glyco_hydro_99
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIZ21334
UniProt:
A0A6H1Q3C8
LinkDB
All DBs
Position
1100757..1102508
Genome browser
AA seq
583 aa
AA seq
DB search
MLKISRESEINLVNVLIDNDIISGKDLINIKKVSTENNKSQIDAIFELKLTDEKKIIDLL
IKEQNLEIIDLKTVKITDEIKTVLPSNYIKINFVAPFKIEGKTLHMAIPDSSKLGLMRNL
KAITKKDIELHAAKITDISEYIERLSNETDEVTIASIRSDNRKKTKTFETDLGDAGEVLE
NAPEEDIEAIENESEVIKFSTAVVADAIKMGVSDIHIEPYRFNSRVRYRLDGMLQEQETY
RQFLHDNYGAVVTRFKIMGKLDIAERRLPQDGAINFKIGNKVVDLRLSILPTANNERIVM
RILNKDAGDITLEQLNFEKQDLESLRKGIHSSQGLILVTGPTGSGKSTTLYSILKEVSRP
HLNILTAEDPVEYELEGVGQVQIKDDIGFTFAKALRSFLRQDPEIILVGEMRDKETVDIG
LKAALTGHLVFSTLHTNDAPSTITRLQNMGTPDYLISAACQLVVAQRLARKNCKDCRVQD
DDVNPKVLKDLGFSEEEASKVKAIKGKGCGKCSDTGYKGRQGIYEILVVSKPIKEAILKQ
ATTPELREIAIKEGFRTMQDMGRRMIASGELNFREYERVLSSE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaattagtagagaaagcgaaattaacttagttaatgtcttgattgataatgac
attatttcaggaaaagatttaataaatattaaaaaagtaagtactgaaaacaataagtct
caaattgatgcaatatttgagttaaaactcactgatgaaaaaaaaataattgatctatta
attaaagaacaaaatttagaaataattgatttaaagacagttaaaattacagatgaaata
aaaacagttttaccatcaaattatataaagataaattttgtagcaccatttaaaattgaa
ggaaaaactttgcacatggcaattccagatagttcaaaactgggattgatgagaaattta
aaagctattacaaaaaaagacattgaactacacgctgcaaaaataactgatatctctgaa
tatattgaaagattatcaaatgaaacagatgaagtaacaattgcatcaatacgtagtgat
aatagaaaaaaaactaaaacttttgaaacagatttaggagatgcaggagaagttttagaa
aatgcaccagaagaagatattgaagcaattgaaaacgagtcagaggtaattaaatttagt
acagcagttgtggctgatgcaataaaaatgggtgtgagtgatattcatattgagccttac
agattcaattcaagagtaagatatcgactagatggtatgcttcaagagcaagaaacttat
agacagtttttacatgataactatggggcagtggttactcgatttaaaattatgggtaaa
ctagatattgctgaaagaagattgccacaagatggagccattaattttaaaattggtaac
aaggtagtggatcttcgtttgtcaatattgcctacagcaaataatgagagaatcgtaatg
cgtattcttaataaggacgcaggagatatcactcttgagcaattaaattttgaaaagcaa
gatttagaaagtttaagaaaaggaattcacagtagtcagggattaattctagttacagga
ccaacaggatcaggtaagtcgacaacattatatagtattttaaaagaagtaagtcgtcct
catttaaatattttaacagccgaagaccctgtggaatatgaattagaaggtgtaggacaa
gtgcaaattaaagatgatattggctttacttttgctaaggccttaagatctttcttaaga
caagacccagaaattattctagttggtgagatgagagacaaagaaacagttgatataggg
ttaaaagctgctcttacaggtcacttagtatttagtactttgcacactaatgatgctcca
agtactattactagattacaaaacatgggtacacccgattatttaataagtgctgcctgc
caacttgtggtagctcaaagactagctagaaaaaattgtaaagattgtagagtacaagat
gatgacgttaatcctaaagttcttaaagatttaggttttagtgaagaagaggcatctaaa
gttaaagctataaaaggtaagggttgtggaaaatgtagcgacactggttataaaggccga
caaggtatttatgaaattttagtggtatcaaaaccaatcaaagaagctattttaaagcaa
gcaacgactcctgaattaagagaaatagctattaaagaaggatttagaacaatgcaagat
atgggtagaagaatgattgcatctggtgaacttaattttagagaatatgagagagttctt
tcaagcgaataa
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