Candidatus Pelagibacter giovannonii: E5R92_06565
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Entry
E5R92_06565 CDS
T06537
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5R92_06565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peg02000
]
E5R92_06565
Transporters [BR:
peg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
E5R92_06565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
nSTAND3
AAA_25
TOBE
Gamma_PGA_hydro
DO-GTPase2
Myosin_N
Gp44_C
AAA_22
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QIZ21440
UniProt:
A0A6H1Q4L3
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All DBs
Position
1226385..1227473
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AA seq
362 aa
AA seq
DB search
MAKNKEFVKFDNVDKSYDGKVLVVKGLNLDIEEGEFVTMLGPSGSGKTTCLMMLAGFETP
THGEIYLDGKVISNIPPHKRGIGMVFQNYALFPHMTVYENLAFPLRVRNIPKDEADKKID
KALSMVSLHGFESRMPMQLSGGQQQRVAVARSLVFDPQVVLMDEPLGALDKNLRESMQYE
IKHIHESIGVTVVYVTHDQTEALTMSNRIAVFNDGKVQQLSSPDELYEKPVNSFVAEFIG
ENNKFLGQVADISGDKCKVKLEDGTEILANSVAVKAKGDKTKVSLRPERAIIDPTDKMDN
NHKGKIEEIIYHGDHTRLRVDLLGNKDFILKVPNSTARLDLKKGNVLNIGWNSVDCRALD
PK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacaaagaatttgtaaaatttgacaatgtagacaaaagctatgatggtaaa
gtattagttgttaaaggattaaatctagacattgaagaaggtgagtttgtaacaatgtta
ggaccctctggttcaggtaaaacaacttgtttaatgatgcttgctggttttgaaactcca
actcatggagaaatttatttagatggtaaagtgatttcaaatattccacctcataaaaga
ggaattggaatggtattccaaaattatgctttatttccacacatgactgtttatgaaaac
ttagcttttccattaagagtaagaaatattccaaaagatgaagcagataaaaaaattgat
aaggctttatcaatggtatctcttcatggttttgaatcaagaatgccgatgcaattatca
ggcggacaacaacaacgtgttgctgtggcaagatcattagtttttgatccacaggtagtg
cttatggatgaacctctaggagcattagataaaaatttaagagagagcatgcaatatgaa
attaaacatattcatgaaagtattggtgtaacagttgtttatgtaacacacgaccaaact
gaggctttaacaatgtcaaatagaattgcagtttttaatgatggtaaagttcaacagcta
tcaagcccagatgaattgtatgaaaaaccagttaattcttttgttgctgaatttattgga
gaaaataataaatttttaggtcaggttgcagatatttcaggtgataaatgcaaagtaaaa
ctagaagatggtacagaaattttagcaaattcagttgctgtaaaagcaaaaggggacaaa
actaaagtttcactaagacctgaaagagcaattatagatcctacagataaaatggataac
aatcataaaggtaaaattgaagaaattatttatcatggtgatcacacaagacttagagtt
gatttactagggaataaagattttatacttaaagtaccaaatagcactgcaagactggat
cttaaaaagggtaatgtgcttaatataggctggaacagtgtcgactgtagagctttagat
ccaaaataa
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