Candidatus Pelagibacter giovannonii: E5R92_06575
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Entry
E5R92_06575 CDS
T06537
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5R92_06575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peg02000
]
E5R92_06575
Transporters [BR:
peg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
E5R92_06575
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QIZ21442
UniProt:
A0A6H1Q3C9
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Position
1228805..1230052
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AA seq
415 aa
AA seq
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MSTEQILSSDGLPLEVSLKKAERKNKLKAVMLVGPLFLFLIITYVFPIGDMLFRSVDDRM
ITKMLPNTFTSLEKWEGKEIPEEPVYAALYEDLAYLKKTKTYGKIIARLNYEKGGFSSLI
KKTVRKIGKFEEGDYKSQFIKTHKRWGDIDYFIALRNAAPNWSYAKYLKGVDLKLDQDGN
IVQQAEDRRIHKILWLRTLKVAFWVTIFCFILAYPISYLLATLPMKYSNLLMICVLLPFW
TSLLVRTSSWMVLLQQQGPINDLIVWLGLAANDARPELMYNVIGTFVAMTQILLPFMVLP
LYSVMKTISPSLMRAGKSLGGTPFVAFRKIYFPLTIPGIGAGSLLVFILAIGYYITPALV
GGASGSLISNTIAYHMKSSLDWSFAAALGTMLLVGVLTIYWIYNKLVGIDNIKLG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaacaaatattatcatcagacggtttgcctctagaggtcagcttaaagaaa
gctgaaagaaaaaataaattaaaagcagtgatgcttgtgggtccattatttttgtttctt
ataattacatacgtatttccaataggtgatatgttatttagaagtgttgatgatcgcatg
atcactaaaatgctaccaaatacttttacatcacttgaaaaatgggaaggtaaagagatt
ccagaagaaccagtttatgcagcactttatgaagatttagcatatttaaaaaaaactaaa
acttacggtaagattatagcaagattaaattatgaaaaaggtggattcagtagtttaata
aaaaaaacagttagaaaaattggaaaatttgaagaaggtgattacaaatcacaatttata
aaaacacataagaggtggggagacatagattattttattgctttaagaaatgcagcacca
aactggtcttatgctaaatatctaaaaggtgtagatttaaagcttgatcaagatggtaat
atagtacaacaagcagaggatagaagaattcataaaatactctggctaagaactcttaag
gttgctttttgggtaactatattttgtttcattcttgcttatccaatttcatacctatta
gctacactacccatgaaatatagtaatttattgatgatatgtgtgcttcttccattctgg
acatcacttttagttagaacctcaagttggatggtcttacttcagcagcaaggcccaatt
aatgatttgattgtatggctcggacttgcagcaaacgatgctaggccagaactaatgtat
aatgtaattggaacttttgttgcaatgactcaaatcttattaccatttatggttttacca
ctttacagcgtaatgaaaacaatatctccaagcttaatgagagctggaaaatctttaggt
ggaacaccatttgtagcatttagaaaaatatattttccattaacaattccaggaattggc
gctggatccttgttagtttttattttagcaataggttattatataacacctgcattagtt
gggggagcaagtggatctttaattagcaatacgattgcttatcatatgaaaagttcttta
gattggtcatttgcagctgcattaggtacaatgttgttagttggtgttttaactatttac
tggatttataataaattagtaggaatagataatattaaactaggataa
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