Candidatus Pelagibacter giovannonii: E5R92_07340
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Entry
E5R92_07340 CDS
T06537
Symbol
speD
Name
(GenBank) adenosylmethionine decarboxylase
KO
K00797
spermidine synthase [EC:
2.5.1.16
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00270
Cysteine and methionine metabolism
peg00330
Arginine and proline metabolism
peg00480
Glutathione metabolism
peg01100
Metabolic pathways
peg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
E5R92_07340 (speD)
00330 Arginine and proline metabolism
E5R92_07340 (speD)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
E5R92_07340 (speD)
Enzymes [BR:
peg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.16 spermidine synthase
E5R92_07340 (speD)
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Gene cluster
GFIT
Motif
Pfam:
AdoMet_dc
Spermine_synth
Cons_hypoth95
Spermine_synt_N
Methyltransf_31
Methyltransf_23
Methyltransf_2
Methyltransf_11
Methyltransf_25
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
QIZ21593
UniProt:
A0A6H1Q5F6
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Position
1363921..1364961
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AA seq
346 aa
AA seq
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MTKVGEHITLDIIGTTQEYDPSVYENVIRKIAKAAEVTILEISKYKFEPQGFTILALLAE
SHISFHTFPEKGIISFDFFTCGKVSPSVALDIVKKEFKYKRIVTKAFDRDTKSLYHDIYS
SPGLQKSYVVNEVLEDFKSKVGQHIEILDLEQFGKSLFIDNEIQVATNDEVLYSSTFVNA
ALKLNKDMGTAAIIGGGDGGVARECMSKGFDFIDWYELDPEVVEVCNKHLGSIGNKSTEK
NSVKCIWGDAFESIKSVEDDKYDKIFVDLNDDLFCIDLASKNMDSLIRILKPNGVITAQV
GSQDKKPEQVEKWLDVFNKNFGNTTLDRVYIPSFDCSWNFSSSINH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagtaggtgagcatataactttagacattataggcactactcaagagtatgac
ccttcagtctacgaaaatgtaattcgtaaaattgcaaaagctgcagaagttacaattctt
gaaatttcaaagtataaatttgaacctcaaggtttcactatacttgccttattagctgaa
agtcacatcagttttcatacatttccagaaaaaggaattattagttttgatttttttaca
tgtgggaaggtaagtccctctgttgcactcgatattgttaaaaaagaattcaaatataaa
agaattgtcacaaaagctttcgatagagatacaaagtctttatatcatgacatttacagt
tcacctggattacaaaaatcatatgtggtaaatgaggttttagaagattttaaatctaaa
gtaggtcaacatattgaaatattagatttagaacaatttggtaaatcattgtttattgat
aatgaaattcaagtcgcaacaaacgatgaggttttgtatagctcaacatttgtaaacgct
gctttaaagttaaataaagacatgggaactgctgcaatcattggtggtggtgatggtgga
gttgcaagagagtgcatgtctaaaggttttgattttatagactggtatgaacttgaccca
gaagtagtcgaggtttgtaataaacaccttggaagcattggtaataaatcaacagaaaaa
aattcagttaaatgtatttggggtgatgcttttgaaagtataaaatctgtcgaagatgac
aagtatgataaaatttttgtagaccttaacgatgatctgttttgtatagatcttgcttcc
aaaaacatggattccttgattagaatattaaaacctaatggagtaatcactgctcaagta
ggtagccaagataaaaaaccagagcaagtagagaaatggttagatgttttcaataagaat
tttggaaatacaactttggatagggtttacattccaagttttgactgttcttggaacttt
tcatcatcaattaatcactaa
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