Planctopirus ephydatiae: Spb1_02640
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Entry
Spb1_02640 CDS
T06220
Symbol
rnz_1
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peh03016
]
Spb1_02640 (rnz_1)
Enzymes [BR:
peh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Spb1_02640 (rnz_1)
Transfer RNA biogenesis [BR:
peh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Spb1_02640 (rnz_1)
Prokaryotic type
Spb1_02640 (rnz_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QDV28401
UniProt:
A0A518GIH4
LinkDB
All DBs
Position
307950..308957
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AA seq
335 aa
AA seq
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MPESLARFHAELTLVNGSTGDPVLLIDYPDRDDAVLLDAGENGSLSLEQLADLSVVLITH
HHIDHFVGLDRIIRANMDRDKTLRIYGPPKTIEKVADRIRSYEFQFFPFQKIVIDIYEIH
ESGFRVGRLDCGRKFPPPEIRDEARTGCVIFENETIQVEAVFAEHTVPCLSYAVIEKAGW
FLNVDALRKSLLKPGSWIGDVLGLLREDAPNGTQVLIEGGSYPLATLRDKFFLKSLGARL
AFVTDTLWNEASRARLVSIAQRASVLYCDSFYAQGQLSQALKYHHMTASQAGELARLAKA
EKLVLIHFAKRYTGKYEVLVDEAREHFAKVTAQIP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagtcactagcgagatttcatgcagaactcactctggtgaatggatcgacggga
gatcctgtcctgctgattgattatccggatcgggatgatgcagttctgctggatgctggc
gagaatggctctctctctctggagcagctggcggatctttcagtggtgctgattacgcat
catcatatcgatcattttgtgggtctggatcgcattatccgtgcgaatatggatcgagac
aaaacgttaaggatctatggcccgccgaagaccattgagaaggtggcggatcgcattcgc
agctatgagtttcaattctttccgtttcagaagatcgtcattgatatttatgagattcat
gaaagtggctttcgtgtgggtcgtctcgactgtggccgaaagtttccaccgccggagatt
cgtgatgaggctcgaacgggatgtgtgattttcgagaatgagacgattcaggtggaggct
gtctttgcggaacatacagtgccgtgtctgagttatgcagtgattgagaaggcgggttgg
tttttgaatgtggatgcactccggaaaagtctattgaagccggggagttggataggggat
gtcctggggcttttgcgtgaggatgctccgaatggaactcaagttctgattgaaggtggg
agttatccactggcaactttgcgagataagttctttctgaagagcctgggagcccggctc
gcttttgtgacagatacgctctggaatgaagcgtctcgagcgaggttagtttcgattgca
cagcgggccagtgttctttattgcgattcgttctatgcccaggggcagttatcgcaggca
ctgaagtatcaccatatgacggcttctcaggcaggtgaattggcacgcctggccaaagcc
gagaagctggtgctgatccattttgccaaacgctacaccggtaagtacgaggtgctggtt
gatgaagcgcgcgaacattttgccaaggtgacggctcagatcccttga
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