Planctopirus ephydatiae: Spb1_04090
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Entry
Spb1_04090 CDS
T06220
Name
(GenBank) Deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_04090
Enzymes [BR:
peh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Spb1_04090
DNA repair and recombination proteins [BR:
peh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Spb1_04090
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QDV28546
UniProt:
A0A518GIX8
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All DBs
Position
488794..490392
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AA seq
532 aa
AA seq
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MPRRSAVRHTPPPGAHRFLIILGDQLDVNSAIFSQYCPETDILWMAETPEEVEQIWSHRL
RITFFFSAMRHFRDELRAKKFRVHYRELNQDPAQDEGQTFTDLLLRDADEFGIRELVVVE
PGDWRVKQRLEAAAQKLGVPLTYLDDTHFFATHADFQKFASGKKKLILEYFYREMRKKHQ
ILVDEAGQPEGGQWNFDHENRESFGSSGPGKLPAPLKFTADAMTQEVMELVRARFPSNPG
EVFDETLAVTRADALKLLKYFVRHHLPRFGRYEDAMWTGEATLHHSRLSVYLNVKLLNPR
ECVQAAVEAYQAGQVDLASTEGFVRQILGWREFIRGIYWSHMPQYAELNFFEHQQPLPSF
FWDGQTEMVCVRESMKHVLKHGYAHHIHRLMVLGNLSQTFGAHPYQFHQWHMAMYLDAID
WVSLPNTLGMSQFGDGGIVGTKPYCATGAYISRMSNFCQSCQFDPKKSTGKDACPITTFY
WDFLSRHREQLRGNQRMAMQLKNVDRKTELELQEIAQRAKELREQWKSQEPH
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccggtctgccgtccgtcacacgccgcctccgggagctcatcgcttcctgatc
attctgggcgatcagctcgatgtgaactcagctatcttttcgcagtattgccccgagacg
gacattctctggatggccgaaacaccggaagaggtcgagcagatctggtctcatcgactg
cgaatcacgttcttcttttcagccatgcggcattttcgagatgaactgcgagcgaaaaag
tttcgtgtgcattatcgcgagttgaatcaggatccggcgcaggatgaagggcagacattc
acggacttactgttgcgtgatgccgatgagtttggaatcagggaactggtggtcgttgaa
cctggggattggcgggtcaagcagcggctcgaggctgccgcccagaagctgggtgtccca
ctgacgtatctcgacgatacacacttttttgccacgcatgcggattttcaaaagttcgct
tcgggcaagaagaagctgattctcgaatacttctatcgcgagatgcgaaagaaacatcag
attctcgttgatgaagctggacagccggaagggggacaatggaacttcgatcatgagaat
cgtgagagctttggttcgagcgggccgggcaagttgccagctccactcaagttcaccgcc
gatgcgatgactcaggaggtgatggaactggtgcgtgccaggtttccatcgaaccccggg
gaagtgtttgatgaaacgttagcagtcacacgggccgatgcactgaagctgctcaagtat
tttgtcaggcatcatctcccgcgatttggtcgatatgaagatgcaatgtggacgggagag
gccactttgcatcattcgaggctatcggtttatctcaatgtcaaactgctcaatccacgg
gaatgtgtgcaggcggctgtggaggcttatcaggctggccaggtggatctggcgagtact
gaaggatttgtgcggcagattcttggctggcgtgagttcattcgaggcatttactggagc
cacatgccccaatatgcagaactgaacttctttgagcatcagcaacccttgccctcgttc
ttctgggatggccagacggagatggtctgcgtgcgtgaatcgatgaagcatgtgctgaag
catggctatgcacatcacatccatcggctcatggtgctgggtaatctttctcagaccttt
ggtgctcatccttatcagtttcatcagtggcatatggcgatgtacctggatgccattgac
tgggtgtcgttgccgaacacactcgggatgagtcagtttggtgatggtggaattgtcggt
accaagccttattgtgccacgggggcttatatcagccggatgagtaacttctgtcagagc
tgccagttcgatcccaagaaatcgacagggaaagacgcttgcccgatcaccactttttac
tgggattttctttcgcgccaccgggaacaattgcgtgggaatcagcggatggcaatgcag
ctgaagaacgtggatcggaagacggaactggaacttcaagaaatcgcacagcgtgccaaa
gagcttcgagagcaatggaaatctcaggagccgcattga
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