Planctopirus ephydatiae: Spb1_04190
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Entry
Spb1_04190 CDS
T06220
Symbol
xylR_1
Name
(GenBank) Xylose operon regulatory protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
peh03000
]
Spb1_04190 (xylR_1)
Transcription factors [BR:
peh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Spb1_04190 (xylR_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
HTH_18
HTH_AraC
PBP1_XylR
Motif
Other DBs
NCBI-ProteinID:
QDV28556
UniProt:
A0A518GIY5
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Position
complement(503253..504482)
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AA seq
409 aa
AA seq
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MSQEAPASQDSSEISPRPATLPVSAMPPTMHRSVALIVHTSSDWTRQVLRGIAQYASEHG
FWDFFIEPRGHDEKLLIPKGWSGDGIIARLTHPALEKQILKSNLPCVNVSWMGQHSLRIP
KVVSDEAACGRLAAEHFLEQSFRSFAYIGPIHRAGYDDLLGKNYINTLLQAGHQTSIYQP
TVPIPVPDLLTQRKGFLQWLKMLPKPTAIFTWSGEVGRELMTCARLSRFRIPDDIALLVG
ENDPLLSALAPVPLSNIDQAPVRVGYEAATLLDKLMNGEPAPDEPILVPPVGVVQRRSTE
TSAVDDPLVDMAVRFMRDHLSEPIQIADVEKALNVSRRVLEHRFHKVLDDTPANVLRRMR
LQNVKRLLGETTLPLARIAQLTGFNHVEVLVRTFRRELGVTPGEYRRRH
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaagcccccgcttcccaggattcgtccgaaatttctccgcgtccagcgaca
ttgccggtatcggccatgccacccaccatgcatcgcagtgtggcactaatcgtccatacc
tcatctgactggacgaggcaggtcttacgcgggattgcccagtatgccagcgagcacggc
ttctgggatttcttcatcgaaccacgcggtcatgacgaaaaactgctgattcccaagggc
tggagtggcgatggcattattgcccgcctcacgcatcccgcactcgaaaagcagatcctc
aaaagcaatctcccctgcgtcaacgtctcctggatgggacagcactccctccggatcccc
aaagtcgtctccgatgaagcggcctgcggaaggctcgctgccgaacatttcctcgaacag
tccttccgcagcttcgcctacatcgggcccattcatcgtgccggatatgacgatctgctg
gggaaaaactacatcaatacgctactgcaagccggccatcagaccagcatttatcagccc
acagttccaattcctgtccctgaccttctaacccaacgaaaaggttttctacagtggctg
aaaatgcttcccaagccaacggcaatcttcacctggagtggtgaagtgggccgcgaatta
atgacctgtgcccgtctcagccgctttcggatccccgacgatattgctctgctcgttggt
gaaaatgatccactgttgtcggcattggcaccagtaccgctttcgaatatcgatcaggct
cctgtccgtgtcggttacgaagcagcgactctgctcgacaaactcatgaatggcgaacca
gcaccagatgagccgattcttgtccccccagtcggtgtggtacagcgccgatccactgaa
acatcggctgtcgatgatcctctggtcgatatggccgttcgttttatgcgcgaccatttg
agcgaaccaattcagattgcggatgtggagaaagctctcaatgtctcccgccgggtgctg
gaacaccgcttccataaagtgctcgacgataccccagccaatgtccttcgcaggatgaga
ctgcagaacgtcaaacgcctcctgggagaaaccacacttccactggcccgtattgcccag
ctcacgggcttcaatcacgtggaagttctggtgcgtaccttccggcgtgagctgggggtc
actcccggcgaataccggcgtcgccactag
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