Planctopirus ephydatiae: Spb1_04880
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Entry
Spb1_04880 CDS
T06220
Symbol
rlmI_1
Name
(GenBank) Ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peh03009
]
Spb1_04880 (rlmI_1)
Enzymes [BR:
peh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Spb1_04880 (rlmI_1)
Ribosome biogenesis [BR:
peh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spb1_04880 (rlmI_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_31
MTS
PrmA
TYW2_N_arc
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QDV28625
UniProt:
A0A518GJ56
LinkDB
All DBs
Position
complement(590393..591670)
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AA seq
425 aa
AA seq
DB search
MSLIRPVDRPPVHLRLARDLSRSIRRGHPWVYAESLREIPKVPAGSRAVLLDYKHNREIA
KGYVDPHSPIAFRACTCDEKDRLDDRWARRQFDRAYRLRKALFRNPFSRDGSARDQIEGV
APVDDMAGRPNLTTGFRLFHGEGDGLPGLVVDVYGDVAVIKLDGPAATTFWQAEGIAEWL
MQATRVKAVVQRERDRGKEARVIAGELTEAAVPFLEYGLKFTADVLHGQKTGFFLDQREN
RALIRKLAYNRRVLNLFSYTGGFSIAAGVGGAQHVTSVDVAEPAIEVARQHWELNELPAS
QHEAIAADVFDFLAEAKKAGHRWEVMVVDPPSFAPSQESLTRAIASYERLFGMAAELVSA
SGLLAVASCSSHLRDQQFLEICEESLSAARRRGRILTFNGPPADHPAPLALREFRYLKFA
LMQLD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgattcgtcctgttgatcgtccccctgttcatttacgcctggcgcgagatctc
tcgcgttccattcggagggggcatccgtgggtttatgcagagtctctgcgcgagattccg
aaagtcccggcaggatcgagagccgtcttgctcgattacaagcacaatcgcgagatcgcc
aaagggtatgtcgatccccatagccccattgccttccgcgcctgtacgtgcgacgaaaaa
gatcgacttgatgatcgctgggcgaggcggcagtttgaccgggcctatcgtttgagaaag
gcgctgtttcgcaatccgttttcgcgagatggttcggcgcgagatcagatcgaaggtgtg
gccccggtcgatgacatggcaggacgcccgaatctgaccaccggttttcggctgttccat
ggggaaggagatggcctgccgggattagtcgtggatgtttacggggatgtggctgtcata
aagcttgatgggcccgcagccaccaccttctggcaggccgaagggattgcggagtggctg
atgcaggccaccagggtcaaggctgtggtgcagcgggaacgcgatcgaggaaaggaagcc
cgcgtgattgcgggtgaactgacagaggcggccgtcccctttctcgagtacgggctgaag
ttcactgcggatgtgctgcatggtcagaagaccgggttctttctcgatcagcgggagaat
cgggctctcatccggaagctggcttacaatcgccgtgtgctcaatctcttcagttatacc
ggtggattctcgattgctgcaggcgtgggtggtgctcaacatgtgacgagcgtcgatgtg
gcagaaccggcaattgaagtggcccggcagcattgggaactcaacgaacttccggccagt
cagcacgaggcgattgcagctgatgtctttgattttctcgcggaagccaagaaggctggc
catcgctgggaagtgatggtggttgacccaccctctttcgcaccctcccaggaatcactg
acccgggcgattgcgagctacgagcggctgtttggcatggcggctgaactggtgagtgca
tccggtctgttagccgtcgcctcctgttcgagccatttgcgtgatcagcagtttttagag
atctgcgaagaatcgttgagtgcagcccgccggcgcggacgcattctcacgttcaacggc
ccccccgccgatcatcccgctcctttggccctgcgagaattccgctatttgaaattcgcc
ttgatgcaactggattag
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