Planctopirus ephydatiae: Spb1_07800
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Entry
Spb1_07800 CDS
T06220
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase Ddl
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00470
D-Amino acid metabolism
peh00550
Peptidoglycan biosynthesis
peh01100
Metabolic pathways
peh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Spb1_07800 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spb1_07800 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Spb1_07800 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
peh01011
]
Spb1_07800 (ddl)
Enzymes [BR:
peh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Spb1_07800 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
peh01011
]
Precursor biosynthesis
Amino acid ligase
Spb1_07800 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
TTL
ATPgrasp_YheCD
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QDV28914
UniProt:
A0A518GJZ8
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All DBs
Position
959838..960857
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AA seq
339 aa
AA seq
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MSRGNIQSAATNPPRWNIALLAGGDSDERSISLRSGQAVCQALQERGHFILPIDPAIVSL
KGMDWNGFDAVFISLHGRFGEDGGVQTLLEESGIPYTGSSSQTSRLAFDKRIAKQNFDRM
QVPTPAWCELSPDESFDSLLMKARELGWPVVIKPASQGSSLGVSIVRQPEQLQSAYERAR
HYDEALIMEAAIVGSEWTVGLHDDEILPPICIETDREFFDWVAKYEDDHTRYIFDKPLPA
TCRQKLETACRGAVHALGVTGISRVDLMLDSEGNPWVLEINTIPGLTDHSLVPKAAQQAG
WTLGELCEESIHRAIQRRPRRPHLLRRASFSTQAKFFPQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcgggaacatacagtctgctgctaccaacccaccacgatggaacattgccttg
ctggccggtggtgattctgacgagcggtcaatcagcctcagaagcgggcaggccgtttgt
caggccttgcaggagcgtggccatttcatactgccgattgaccccgccatcgtttcactc
aagggaatggattggaacggtttcgatgcggtctttatctccctgcatggacggtttggc
gaagacggcggtgtgcagacattgctcgaagaatccggaattccttacacggggagcagc
agtcagacttcccgtttagcgtttgataaacgcattgccaaacagaattttgatcgcatg
caggtgccaactcccgcctggtgcgaactttcacctgacgagtcattcgatagtttgctg
atgaaggcccgggaactgggttggcctgtggtcattaaacctgcatcgcaaggctcgagc
ctgggcgtctcgattgtccgccagccagagcaacttcaatccgcttatgaaagggcacgc
cattacgacgaggccctcattatggaagcggcaattgtgggcagcgaatggactgtcggc
ctgcatgacgatgaaatcttgccaccgatctgtatcgagacagaccgcgagtttttcgac
tgggtcgcgaaatacgaagatgaccacacacgttacatcttcgacaaacctctcccggca
acatgccgacagaagctggaaactgcctgccggggagccgtccacgctctgggtgtgacc
ggaatctcccgggtcgatctgatgctcgattcggaagggaacccatgggttcttgaaatc
aacaccattcccggattaaccgatcacagcctcgttcctaaggcggctcagcaagccggt
tggactttgggagaactgtgcgaagagtcgattcaccgcgccatccaaagacgcccccgc
agacctcacttactcagacgtgcttcgttttcgacgcaggcaaaatttttccctcaatga
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