Planctopirus ephydatiae: Spb1_08760
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Entry
Spb1_08760 CDS
T06220
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peh03032
]
Spb1_08760 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_08760 (gyrA_1)
Enzymes [BR:
peh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Spb1_08760 (gyrA_1)
DNA replication proteins [BR:
peh03032
]
Prokaryotic type
DNA Topoisomerases
Spb1_08760 (gyrA_1)
DNA repair and recombination proteins [BR:
peh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Spb1_08760 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SNaCT5
Motif
Other DBs
NCBI-ProteinID:
QDV29008
UniProt:
A0A518GKB1
LinkDB
All DBs
Position
complement(1083407..1085752)
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AA seq
781 aa
AA seq
DB search
MTENQEDRIQFREISSETRRRYLNYAMSVIQSRALPDVRDGLKPVQRRILYVMYEELRLT
ADAKTRKCAKISGDTTGNYHPHGNQSVYDTLVRLAQDFTLRYPLVDGQGNFGSIMGLPAA
AERYTEARLTGIAEQLMNELRFDTVEMRPNYDGTRKEPVVLPTRFPNLLVNGTAGIAVGM
ATNMPPHNLKEVLEACIHLITNPEASTKELLKFIKGPDFPLGGRMITDRKAMLPIYEEGR
GAFKVRAEWRMDKEKRAEVEDRVVIYSVPYGVETGPLLAEIGNVIASRKLPQLINAADET
DDKHGLRVVLELKKGSDPESVMAFLYKKTPLEQNFNYNSTVLIPDDQGLLTPARLPLHLL
LGEFLKFRLKVVKKRFQFQLDQLQARIHILRGLEIIFNGIDKAIKIIRNSNGKRDACDKL
MAAFPLDEPQTMAILEMQLYRISQLEIDTVLAELNTKQKEADRITRILAKDDRIWNVIEG
ELRELSEQFGDKRRTTLGSSDEVTEFDESHYIVRENTNVVLSKDGWIKRVGRLQSVESTR
VREGDQVLDVLPGSTVDHVIFFASDGIAYTMPISQVPVSSGYGEPLTKHYKFKDGVQVIA
AVTTDPRFTAVTEETAEGAEPAPPHLFVTTAQGQVMRVPLQPFRTASTRSGRKFCKLQEG
DVVAKVELIVDQTSVFLVTREARLIHFSLEEIPVLSGAGKGVRGIRLEEKEKDLVLGAAL
MSRPSDVLRLKLANEKELTCGQMKYALTTRGGKGVKVSHRSQVGEIVRPEIALVDWNSIE
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaaatcaggaagaccggattcagtttcgggaaatctcctctgagacccggcgg
agataccttaactacgcgatgtctgtcattcagtcgcgtgctttgcccgatgttcgagat
ggtctcaaacccgtccagcgtcgcatcctctatgtgatgtacgaagaattgcggctgacg
gcggatgcgaagacgcgcaaatgcgcgaagatctccggcgataccaccggcaattatcac
cctcacggcaatcaatcggtctacgacacactcgttcgcctcgctcaagatttcaccttg
agatacccgctcgtcgacgggcagggaaattttggctccatcatgggcctgcccgctgcc
gccgagcgatacaccgaagccaggttgacgggcattgccgaacaacttatgaacgaactg
cggttcgacactgtcgaaatgcggcccaactatgacggcacccgcaaagaaccagtggtc
ctgccgacccgatttcccaatctgctggtcaatggtactgccggcattgccgtggggatg
gcgacgaatatgccgccccataacttaaaagaagtgctcgaagcctgtattcacctcatt
acaaatcctgaggcgtctaccaaggaactgctcaagttcatcaagggccccgattttccg
ttgggtgggagaatgattaccgatcggaaagcgatgctccccatttatgaggaagggcgt
ggggctttcaaggtgcgggccgaatggcggatggataaagagaagcgggcggaagtggaa
gaccgggtggtgatctattcagtaccttatggcgtcgaaacagggccgttactcgcagag
attggcaatgtgatcgccagccgcaagctgcctcaactgattaacgcagctgatgaaacc
gacgataaacacggcttgcgtgtggttctggaactgaagaaggggagtgacccggaatcg
gtgatggcgttcctctacaagaagacgccactggagcagaacttcaactacaacagcacg
gtcttgattccggatgatcaggggttgttaactccagcacgattgccgctccatcttctg
ctgggtgagtttctcaagttccgtttgaaggttgtcaagaaacgtttccagtttcaactc
gatcaactgcaggcgcggattcatatcctgcggggtctcgagatcatctttaacgggatc
gacaaggcgatcaagatcattcgcaatagcaacggcaagcgagatgcctgcgacaagttg
atggcggccttcccactcgatgaaccgcagaccatggcgatcctcgaaatgcagttgtac
cgcatttctcaactggaaattgataccgtcctcgcggaactgaataccaaacagaaagag
gccgaccggatcacacgcattcttgccaaagacgatcgcatctggaatgttatcgaaggc
gaactgcgcgaactcagtgagcagtttggcgataagcggcgaacgactttgggctcttcc
gacgaagtcactgagtttgatgaatcgcactatattgttcgcgagaacacgaacgtcgtg
ctcagcaaggatggatggatcaagcgtgtcggccggctgcaaagtgtggaatcgacgcgc
gtccgtgaaggcgatcaggtgctcgatgtcctcccagggagcacggtcgatcatgtgatc
ttctttgcgagcgatgggattgcctacacgatgcccatttctcaagtgcccgtttcttcc
ggctacggcgagccacttaccaagcattacaagttcaaagatggtgtgcaggtgattgct
gccgtcacgacagaccctcgctttactgcggttaccgaagagacagccgaaggagctgaa
ccggcaccgccacatctctttgtcaccacagcccaggggcaggtgatgcgggtgcctttg
cagccatttcggacagcgagcacgagatcgggccgcaagttctgtaagctgcaggaaggt
gatgtggtggccaaggtcgaattgatcgttgatcagacatcggtctttctcgtcactcgc
gaagcgcggctcattcacttctcactcgaagagattcctgtcctttctggagcagggaaa
ggtgtgcgcggcattcgcctggaagagaaagagaaggatctcgtcctgggtgcggcactg
atgtcgcgacccagcgatgtgttgaggctcaagctggctaacgaaaaggaactgacctgc
gggcagatgaaatatgcattgacgacacgtggaggcaaaggggtcaaggtcagccatcgc
agtcaggtgggcgaaattgtgcgacccgagattgcactggtggattggaacagcattgaa
ggttga
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