Planctopirus ephydatiae: Spb1_09430
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Entry
Spb1_09430 CDS
T06220
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh02024
Quorum sensing
peh03060
Protein export
peh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Spb1_09430 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Spb1_09430 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spb1_09430 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
peh02044
]
Spb1_09430 (ffh)
Enzymes [BR:
peh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Spb1_09430 (ffh)
Secretion system [BR:
peh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Spb1_09430 (ffh)
Eukaryotic Sec-SRP protein
Spb1_09430 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
AAA_31
AAA_18
AAA_33
nSTAND3
APS_kinase
AAA_30
NTPase_1
Thymidylate_kin
TctA
cobW
AAA_7
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
QDV29075
UniProt:
A0A518GKC7
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All DBs
Position
complement(1165215..1166690)
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AA seq
491 aa
AA seq
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MFESITQGLQGALTGIFRSGKLTEANIREGLKQVRQALLEADVEYNVATQFIEKVTAEAV
GEKVLKSLRPDEQLIGIVHQQLIALMGPTDHSLHLRRDGINKIMMCGLQGAGKTTTCGKL
ARKLKADGWKPLLVAADMQRPAAIEQLKTLGQQLDVPVYAEAPGGNPVAVCKNGLAHAKT
AGANVVIFDTAGRLHVDDRLMFELEQIDSRVQPDQVYLVCDAMTGQDAVRSAKAFNDALE
LDGVILTKLDGDTRGGAAISVKQVTGVPIKFVGMGEQLDRLEPFHPDRMAGRILGMGDIV
TLFERAQEEFDAEEMERQQQRMLKGRFTLEDFRNQMKQVRRLGSLGDIMKMIPGMGGLLD
QFQNIDAEKDMGRIDAIISSMTLDERQNPDRIDRSRRTRIARGSGTDPADVNRLLKDFDN
MSSMMQKMSGLGVKDRFRAVQDLAKVGGMNPAAGLQAQKQRSKRGPADADLAAEKKKKAR
KEAKKQRKKNR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatcgattacccaaggcctgcaaggggctctcacgggcattttccgttctgga
aaactgaccgaagccaatatccgcgaaggacttaagcaagtccggcaggcactcctcgaa
gctgacgttgaatataacgtcgccacgcagttcattgaaaaagtgactgccgaggctgtg
ggtgaaaaggttctcaaatcacttcgacccgacgaacaactcatcgggattgttcatcag
cagcttattgccctcatggggccgaccgatcactcgctgcatctccggcgggatggtatc
aacaaaatcatgatgtgcggcctccagggggccggtaaaaccaccacttgtggcaaactg
gctcgcaagttgaaggccgatggctggaaaccgctcctcgtagctgccgacatgcagcga
ccggcggctattgaacagctcaaaactctgggccagcaactggatgttcccgtgtatgcc
gaagcacccggcggcaacccggtcgctgtctgcaaaaatggtttggctcatgccaaaacg
gccggtgcgaacgtcgtcattttcgatacggcaggccgccttcacgttgatgaccgcctg
atgttcgaactggagcagatcgattcgcgcgtgcagcccgaccaggtctatctcgtctgc
gatgccatgacgggccaggatgcggttcgctcggccaaggctttcaacgatgccctcgaa
ctcgacggtgtgattcttaccaagctcgatggcgatacccgcggtggggctgccatcagc
gtcaagcaggtcacgggtgtcccgatcaagtttgtcgggatgggcgagcaactcgatcga
ctcgagcccttccatcccgatcgtatggccggtcgaattctgggaatgggtgatattgtc
actctgttcgagcgggcccaggaagagttcgatgcggaggaaatggagcggcagcagcag
cggatgctcaagggccgcttcacgctggaagactttcgcaatcagatgaagcaggtgcgt
cggttgggctcactgggcgatatcatgaaaatgatccccggtatgggtgggctgctcgat
cagtttcaaaatatcgatgccgaaaaagatatgggtcggattgacgccatcatcagctcg
atgactctcgatgaacggcaaaatccagatcggattgatcgctcccgccgcacgcgtatt
gcccgaggaagtggtaccgatcctgccgatgtgaatcgtttgctcaaagacttcgacaac
atgtcgagcatgatgcagaagatgtccgggctgggtgttaaagatcgtttccgtgccgtt
caggatctggccaaagtgggcgggatgaatcctgcagctggtctgcaggcacagaaacaa
cgcagcaaacgtggcccggctgatgcggacctggctgcggaaaagaagaaaaaagctcga
aaagaagctaagaaacagcggaaaaagaaccgctga
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