Planctopirus ephydatiae: Spb1_11090
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Entry
Spb1_11090 CDS
T06220
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00220
Arginine biosynthesis
peh00240
Pyrimidine metabolism
peh00250
Alanine, aspartate and glutamate metabolism
peh01100
Metabolic pathways
peh01110
Biosynthesis of secondary metabolites
peh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Spb1_11090 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Spb1_11090 (carB)
00220 Arginine biosynthesis
Spb1_11090 (carB)
Enzymes [BR:
peh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Spb1_11090 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_5
ATP-grasp_2
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
QDV29230
UniProt:
A0A518GKS3
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All DBs
Position
1355899..1359171
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AA seq
1090 aa
AA seq
DB search
MPRRDDLKKILIIGSGPIVIGQACEFDYSGTQACKALRECGYEVVLVNSNPATIMTDPNT
ADSTYIEPIHWQYVAKIIENERPDAILPTLGGQTGLNTGMELFRRGILEKYNCEMIGARA
DVIEKAEDRQLFKEAMQKIGLDVCRSRIVNSMEEARDVLKEIGLPIIIRASFTLGGMGGG
IAYNREEFEEKVRKGIELSPIHEVLLEESIIGWKEYEMEVMRDKADNVVIICSIENLDPM
GVHTGDSITVAPAQTLTDREYQRMRDATIAVMREIGVETGGSNVQFAIHPQTGRMVVVEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDEIPNDITRETLACFEPTIDYVVTKVPR
WTFEKFPEADPELTVQMKSVGETMAIGRTFKESLQKALRGLEIGHFGLGGGKKDLWDSDH
RPTIEEIESKLATPNDMRIFYLRYAMKAGLSNSEIHDLTKIDPWFLENIRDIVRMEDRLR
SHERLDQVSDELLREVKRYGFSDKQIGDWLDISDMEVRRERKRRGILPTFKQVDTCAAEF
EAYTPYYYSTYESEDEAPGPRTDGRQRVIILGGGPNRIGQGIEFDYCCCQASFALRELGI
ESVMVNSNPETVSTDYDTSDLLFFEPLTTEDVLNICDRLQPDGVIVQFGGQTPLNLARGL
EQAGVKIIGTSPSMIDAAEDREIFKGILDKLGLHQPPNGMATDAARAVQIASEIGYPVLV
RPSFVLGGRAMQICYDERMVREYMTEAVNVSPDRPVLIDKFLEDAVEVDVDAISDGETTV
VGGVMEHIEEAGVHSGDSACVLPPYSLPDAIVDEIKTATYALAKELQVRGLMNIQFAVKH
QGGEPVVYVLEVNPRASRTSPFVSKATNVPLPKLAAKIMVGKTLKELGFTKEVVPPYVSV
KESVFPFTRFAGVDIILGPEMKSTGEVMGIDSTFPAAYARAQLGAGNKLPSSGAVFISLA
GRHKEHIISSARRLIDMGFKILATSGTSRVLREAGIEVETVRKLQEGRPNLLDYMANNQV
QLVFNTPSGKGARSDEGRIRAAAVMNGIPCVTTLPGCIAVVQALESIQESPEPSVTSLQK
WIAQLPASEA
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgccgcgacgacctcaagaagatacttattattggttcgggccctattgtcatc
gggcaggcatgcgaattcgattattcagggactcaggcctgcaaagctttgcgcgagtgt
ggatacgaggtcgtgctcgtcaattccaaccccgccaccatcatgactgacccgaatacg
gccgattccacctacatcgagccgattcattggcagtatgttgccaaaattatcgagaat
gaacgtcccgatgcgattctccccacgctgggtggccagacgggtctgaataccggcatg
gaactgttccgccggggcattctcgaaaaatacaactgcgagatgattggggctcgcgcg
gacgtcattgaaaaggccgaagatcgccagctcttcaaagaagcgatgcagaagatcggg
ctcgatgtctgtcgcagccggattgtgaactcgatggaagaggcccgcgacgttctcaag
gaaatcggccttcctattatcattcgcgccagttttactctgggcggcatgggcggcggt
atcgcttacaaccgcgaagaattcgaagaaaaggttcgcaaagggattgaactctctccc
atccatgaagtcctccttgaggagtcgatcattggctggaaagagtacgagatggaagtg
atgcgggataaggccgacaacgtcgtcattatctgctccatcgagaacctcgacccgatg
ggtgtgcacacaggtgattcgatcaccgtcgcacctgctcagacactgacggaccgtgaa
tatcagcgcatgcgtgatgccacgattgccgtcatgcgggaaattggcgtggagaccggt
ggctcgaacgtccagttcgccattcatccacagaccggccgtatggtcgtggtggagatg
aatccgcgtgtcagtcgctccagtgctttggcttcgaaggcgacgggcttcccaatcgct
aaaattgctgccaagctcgccgtcggcttcacactcgatgaaattcccaatgacattacc
cgggaaacgctcgcctgctttgaaccgacgatcgattatgtcgtcaccaaggttccccgc
tggacattcgaaaagtttcccgaagccgatcctgaactcactgttcagatgaagtcggtt
ggcgaaaccatggcgattggccgtaccttcaaggaatcactgcaaaaagctcttcgcggc
ctcgaaatcggccactttggcttaggtggcggcaagaaagatctctgggattccgatcat
cgccccaccatcgaagaaatcgaaagcaagctcgccactcccaacgacatgcggattttt
tatctccgctatgcgatgaaagctggcctcagcaattccgaaatccacgatctcaccaag
atcgacccgtggttcctcgaaaacattcgcgacatcgtccgcatggaagaccgcctgcgc
agccatgagcgactcgaccaggtctctgatgaacttctgcgggaagtgaaacgctacggc
ttttccgataagcagatcggcgactggctcgatatctcggatatggaagtccggcgtgaa
cgcaaacggcggggcattctccccacattcaagcaggtcgatacctgtgctgctgaattc
gaagcttacacgccttattactactcgacctacgaatcggaagacgaagcccccgggcca
cgcaccgatggtcgtcagcgagtgatcattttaggtggcggccccaacagaattggccag
gggatcgagttcgattactgctgctgccaggcctcgttcgcacttcgcgaactgggtatt
gaatcggtcatggtcaattccaatccggaaacggtttcgacggattacgacacgtcggat
ctgctcttctttgaaccactcaccacggaagacgtgctgaatatctgcgatcgacttcag
cccgacggtgtgattgttcaatttggtggacagacaccactcaacctggcccgtggtctc
gaacaggcgggcgtgaagatcatcggcacaagtccatcgatgattgatgccgctgaagat
cgcgagatcttcaagggtattctcgacaaactgggcctccaccagccacccaacggcatg
gcaaccgatgccgctcgcgctgtgcagattgccagtgaaattggttatcccgtcctcgtc
cgccccagctttgtgctgggtggccgggccatgcagatctgttacgacgagcgcatggtg
cgcgaatacatgacagaagccgtcaatgtttcacccgatcgtccagtgctcatcgataag
ttcctcgaagacgcggtcgaagtcgatgtcgatgccatttctgatggtgaaacgactgtc
gttggcggtgtgatggagcacatcgaagaagcgggcgttcactccggcgattccgcctgt
gttctgccaccttattccctccccgacgccattgtcgatgaaatcaaaacggccacttat
gcactggccaaagagctgcaggtgcgtggcctgatgaatatccagttcgccgtcaaacat
cagggtggcgaacctgtcgtctatgttctcgaagtcaatcctcgggccagccgcacatcg
ccgtttgtgagcaaagccacgaacgtccctttgcccaagctggcagccaagatcatggtt
ggcaagaccttgaaagagctgggcttcacgaaggaagttgttccgccttacgtttcggtc
aaagagagtgtcttcccattcactcgatttgcgggtgtcgatatcatcctcggtcccgag
atgaaatcgacgggcgaagtcatggggatcgactcgacattccctgctgcgtatgccagg
gctcaacttggtgccgggaataagctcccttcgagtggagccgtctttatcagtcttgct
ggccgacacaaagagcacatcattagcagtgcccgtcggctgattgatatgggcttcaag
attctggcgacctcggggacttcgcgtgtcctgcgggaagccggtatcgaagtcgagaca
gttcgtaaactgcaggaaggtcgcccgaacctgctcgattacatggctaataaccaggtt
caacttgtcttcaatacacccagtggaaagggtgcccgttccgacgaaggccgcattcgt
gccgcggctgtcatgaatggtatcccctgcgtaaccacgctgcccggttgtattgccgtc
gtgcaggccctcgagtcgattcaggagtcaccagagccgagcgtgacatccttgcagaag
tggattgctcagttacctgccagcgaagcgtaa
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