Planctopirus ephydatiae: Spb1_12440
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Entry
Spb1_12440 CDS
T06220
Symbol
nicS
Name
(GenBank) HTH-type transcriptional repressor NicS
KO
K23777
TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
peh03000
]
Spb1_12440 (nicS)
Transcription factors [BR:
peh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Spb1_12440 (nicS)
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GFIT
Motif
Pfam:
CecR_C
TetR_N
Popeye
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
QDV29358
UniProt:
A0A518GLB3
LinkDB
All DBs
Position
1523873..1524532
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AA seq
219 aa
AA seq
DB search
MPPSSDDTRTRLVEAAGLMFADKGFDAAGVREICHEAKANVAAIKYYFGDKRSLYKAVLE
HVHVCKENLGQVMASDEWQAQAPLNQLKSFILEMVKEHLASQKPAWHLEIMLWEMTRPTP
EGKEVIELQLRPMATHLKKILRQIVGDDIPEETIWKCGFSIVGQVLFYYVHQAIARQLAG
DTIYNQLTVEQIASHIYQFSVAGLATVANRPELVTQIDL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcccccctcttcggatgatacccggacccggctggtggaagcggctggtctgatgttt
gcggataaaggatttgatgctgcgggtgtccgggagatttgtcacgaagccaaggccaat
gtggcggccatcaagtactactttggggataaacgcagtctttacaaagctgttctcgaa
catgtgcatgtctgcaaggaaaatcttgggcaggtcatggcgagcgatgagtggcaggct
caggcaccactgaaccagttgaagtctttcattctcgaaatggtcaaggagcatctggca
agccagaagccggcctggcacctcgaaatcatgctctgggaaatgaccaggcccactcct
gagggcaaagaagtgattgagctgcaactccgcccgatggccacgcatcttaagaaaatt
ctcaggcagattgtgggagatgatatccctgaagaaaccatctggaagtgcggcttcagt
atcgtggggcaggtacttttttactacgttcatcaggcgatcgcccggcaattggcgggg
gacactatttacaatcagctcacggtggagcagatcgccagtcatatatatcaattctca
gttgcgggattagcaacggttgccaaccgaccagaactggtcactcaaatcgatttataa
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