Planctopirus ephydatiae: Spb1_15730
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Entry
Spb1_15730 CDS
T06220
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh03420
Nucleotide excision repair
peh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Spb1_15730 (pcrA_1)
03430 Mismatch repair
Spb1_15730 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_15730 (pcrA_1)
Enzymes [BR:
peh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spb1_15730 (pcrA_1)
DNA repair and recombination proteins [BR:
peh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spb1_15730 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Spb1_15730 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
AAA_16
DUF7381
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QDV29659
UniProt:
A0A518GM61
LinkDB
All DBs
Position
1936567..1939104
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AA seq
845 aa
AA seq
DB search
MTQLLDDLTPSQAAAVEHFEGPMLVLAGPGSGKTRVVTRRIARLIERRVHPAEILAITFT
NKAAREMAERVEHLIPGRRVAVSTFHKFCARILRQYGGVVGLKPNFSILDVKDQDAALKE
AVKEEGFDPTHYSPSRIGWRIGQLKNECITPALFAQQAGERVGTHLDSVVAKAYGRYQQI
LLDANAVDFDDLLLHVVTILKENPNLRQSLDERYRFILVDEYQDTNQAQYQIVSALSQNE
PNLCATGDPDQSIYGWRGAQIENILRFERDFPRVKIVRLEDNFRSTPEILAAADDLIRHN
TQRKAKSLRTSNPSGLPVEIRQYADGFQEADSLAAEIRERVASGERQYSDFAIFYRVNSL
SRSIETALGRARVPFAITGGVAFYERTEVKDLIAYLRVIENPDDRPAFRRIVNTPVRGIG
KNSQEKLDRWASARNLNLWDAVHQIDASIGLPKKAEYSLKLFANLLDELARRSHGPIAEL
LEVIVERTGYLQNLSGLEPEEFANRKANVEELVASARQFDQDHVERGSLSEFLETCSLVQ
DADTIDESAGQVQLMTLHSAKGLEFPCVYLVGVEHGLLPHERSLRDGDPLQIEEERRLLF
VGMTRAREELYLTWTRLRSTHGRLLSTIASQFLTELNVARHDYSTDDDTSFGDWSPQEMR
RGTSGDSILAQMADWGEQARKESSNPPDETTSTEDDHADLAEPGVDSQLFTSSEEDAQPK
ANFIDRVLESAVTSEDSSGHETAATQPVITRNSRSFSKKKAPRVPEAERIDQLKSRLMTG
ADLMARDQSLNRFQLGMQVRHPEYGRGLVVGLSLANNRPTVRVEFESSREEKDFIISHAP
LQPLR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaacttttagatgatttgacaccatcgcaggcagcggccgtagaacacttcgaa
ggtcccatgctggttctagccggcccggggtcgggaaaaacccgtgtggtcacccggcgg
attgccagactcatcgaacggcgggtccatcccgcagaaattctggccatcacattcacc
aacaaagccgcccgggagatggccgaacgtgtcgagcacctcattcccggaagacgggtg
gcagtcagcacatttcataagttctgtgcccgcatcttgaggcagtatggcggtgtcgtt
ggcctcaaacccaatttctcaattctggatgtgaaagatcaggatgcagctctgaaagaa
gctgtcaaagaggaaggcttcgaccccacgcattacagccccagtcgcattggctggcgg
attggtcagctaaaaaacgagtgcatcacaccggccctgttcgcacagcaggctggcgaa
cgcgtcggcacacatctcgattcagttgtcgccaaagcgtatggccgatatcaacagata
ctccttgatgccaatgccgtcgatttcgacgacctgttgctgcatgtggtgaccatcctc
aaagaaaacccgaatctacgacaatcgctcgatgaacggtatcgcttcatcctcgtcgat
gaataccaggataccaatcaggcgcaataccagattgtctccgccctctcacaaaacgag
cccaacctgtgtgccacaggcgatcctgatcagtcgatttatggctggcggggagcacaa
atcgagaacatcctgcgatttgaacgcgacttcccccgcgtcaagattgtgcgactcgag
gacaatttccgcagcaccccggagatcctggcagcagccgacgacctgattcgccataac
acccagcgcaaagccaaaagtctcagaacgtcaaatccttcgggtttacctgtggagatt
cggcagtatgccgatggcttccaggaggcggattcgctggcggccgaaatccgcgagcga
gtggccagtggcgaacgccaatactcagactttgccatattttaccgcgtgaactcgctc
tcccgctccattgaaacagctctcggacgagcccgcgtcccgtttgccatcaccggtggt
gtcgcgttctatgaacggacggaagtcaaagacctgattgcctatttgcgggtcattgag
aacccggatgatcgccctgcgtttcggcggattgtgaacacacccgtccgtgggatcggc
aagaattcgcaagaaaagctggatcgctgggccagtgctcgaaatctcaatctgtgggat
gcagtgcatcagatcgatgcttccatcggtctaccgaaaaaagccgagtactcgctgaaa
ctgtttgccaatctgctcgacgaactggcccgtcgatctcatgggccgattgcagaactg
ctggaggtaattgtcgagagaactggctacctgcagaacctgagtggactcgaacccgaa
gagttcgccaatcgcaaagccaacgtggaagaactggtcgcgagcgcccgccaattcgat
caggatcatgtcgaacgtggttcactcagtgaattccttgaaacctgctccctggtgcag
gatgcggacacgattgatgagtcagccggacaggtgcaattgatgactttgcattctgcc
aaaggcctggagttcccttgcgtctacctggtgggtgtcgaacatggattattgcctcac
gagcgctcattgcgtgatggcgatccactccagatcgaagaagagcggcggttgttgttt
gtcggtatgactcgggcccgcgaagagttgtatctcacctggacacgcttgcgatccacc
catggccggttactcagtacgattgccagccagtttttgactgagctgaatgtcgcgcga
cacgattactccaccgatgatgacacctcttttggcgactggtctcctcaggaaatgcga
cgggggacatccggagattcaattctcgctcaaatggctgactggggagaacaagccaga
aaagagtcctccaatccacctgacgaaaccacctcgacagaagatgatcatgcagatctg
gccgaacctggcgtcgattcacagctcttcacttcctctgaagaagacgcacagccgaag
gcgaactttattgaccgagttctggaatctgcagtgacctccgaagattcgagtggccac
gagactgcggccacacaaccggtgataacgcgaaactcccgatctttctcgaagaagaaa
gctcctcgcgtgccagaagccgaacgtatcgatcagctcaagtcgcggctgatgacggga
gccgatctgatggctcgcgatcaatcgcttaacaggtttcaactgggaatgcaggtcagg
caccccgaatatggccgcgggctcgtggtgggattatcgttggccaacaaccggcccaca
gtccgcgtcgaatttgaatccagccgggaagaaaaagacttcatcatttcccacgctccg
ctgcaaccccttcgctga
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