Planctopirus ephydatiae: Spb1_15780
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Entry
Spb1_15780 CDS
T06220
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spb1_15780 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
peh01007
]
Spb1_15780 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peh03016
]
Spb1_15780 (serS)
Enzymes [BR:
peh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Spb1_15780 (serS)
Amino acid related enzymes [BR:
peh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Spb1_15780 (serS)
Transfer RNA biogenesis [BR:
peh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Spb1_15780 (serS)
Prokaryotic type
Spb1_15780 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF6381
HIP1_clath_bdg
Motif
Other DBs
NCBI-ProteinID:
QDV29664
UniProt:
A0A518GM79
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All DBs
Position
1944804..1946096
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AA seq
430 aa
AA seq
DB search
MLDLQFICDNLELITKNCADRNVAIDLSRLLELRDKRIELIQQADQTRHAQKELSAAIPK
MADPTEKQKLVAEGRTLREKIATFETQQQEVEAALREIQAQVPNLTHPDAPVGPDETFSK
VIRTWGTPRAFDFKVRDHVELAEICDLIDFQAGTKVAGHGFYFLKNEAVLLELALVQFAI
QKLVAKGFTPYVTPDLARHEVLEGTGYNPRGNETQIYSINGTDLSLVATAEIPLGGSLKD
EILDIEQLPIRMAGLSHCFRTEAGAHGRASRGIYRVHQFTKVEMFAFTAPDLTASNAMHE
EIVAIEEEVFQQLGIPYQVLDTCSGDLGAPAYRKYDLEAWMPGRNTFGEVTSASNCTDFQ
SRRLGIRCRLPEKKGTQHVHTLNGTCVAISRALIAVLENYQLADGGIEIPEILRPWVGKH
HIAPRRAAIV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcttcagtttatctgcgacaatctcgaactgatcacgaagaattgtgccgac
cgcaacgtggccattgatctgtcgcgattattggaactgcgggacaagcggattgaactg
atccagcaggccgaccagacccgccatgcccagaaggaactttcggcggccatccccaaa
atggctgaccccaccgagaagcagaaacttgtcgccgaaggccggactctgcgagagaaa
atcgcgacattcgaaactcagcagcaggaggtcgaagccgccctgcgggaaattcaggct
caggtccccaatctcactcatcccgacgcacctgtcggcccggatgaaaccttcagcaaa
gtcattcgcacctggggaacacccagggcgttcgatttcaaagtgcgagatcacgtggag
ctggctgagatctgcgacctgattgactttcaggccggaactaaagtcgctggccatggc
ttttactttttgaagaacgaagccgtgctgctcgaactggcactggtgcagttcgccatc
cagaaacttgtggccaaagggtttacaccatatgtcactcctgatctggcacgccacgaa
gtgctcgaagggacaggctacaacccgcgcggcaacgaaacacagatttactcgatcaat
ggaacggatttgagcctcgtcgccacagccgagatccctctgggtggttccttgaaggat
gagattctcgatatcgaacagttacccattcgcatggccggattgtcgcattgcttccgc
acagaagccggcgctcatggccgggccagccgggggatttatcgcgttcatcagtttacc
aaggtcgagatgtttgctttcacagctcccgacctgacagcttccaacgcgatgcacgaa
gagatcgtggcgatcgaagaagaagtcttccagcagttgggtattccttatcaggttctc
gatacctgcagtggagacctgggggcaccagcctatcgcaagtacgatttagaagcctgg
atgcccggccgaaacaccttcggcgaagtgacctccgcatcgaactgtaccgattttcaa
tcgcgtcggctggggattcgctgtcgtctgccggagaagaagggaacgcagcatgtccac
acactgaatggcacctgtgtggccatcagtcgcgccttgatcgccgtgttggagaactat
cagttggctgacggcgggattgaaatcccggagatcttgaggccctgggtggggaaacat
cacattgcgccaaggcgagcagccattgtctga
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