Planctopirus ephydatiae: Spb1_18160
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Entry
Spb1_18160 CDS
T06220
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
peh
Planctopirus ephydatiae
Pathway
peh02020
Two-component system
peh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spb1_18160 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spb1_18160 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peh03021
]
Spb1_18160 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
peh02035
]
Spb1_18160 (fliA)
Transcription machinery [BR:
peh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spb1_18160 (fliA)
Bacterial motility proteins [BR:
peh02035
]
Flagellar system
Flagellar assembly proteins
Stator
Spb1_18160 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
DUF7376
GerE
Motif
Other DBs
NCBI-ProteinID:
QDV29896
UniProt:
A0A518GMV9
LinkDB
All DBs
Position
complement(2237619..2238398)
Genome browser
AA seq
259 aa
AA seq
DB search
MVTRVIEDIQAVWNAYKQDQSSKALRNRLMENYLPLVRYNAERVWSKLPDGVDINDLISA
GVFGLMDAIEAFDMERGVKFETYCVPRIRGAMLDELRTMDWVPRLVRSKASKLESARKQA
EAELGRPPADNEVAAKMGVPLDEYEKLKSEASAVNLVSLNKKWYETDSYKDVREIDIIED
TKGEDPTLSIQKRDLMKLVTKGLNRNERLIIILYYYEELTMKEIGSTLGLSESRVSQMHS
SIVNRLKEQLGRRKPEFAQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccagggttatcgaagacattcaggccgtctggaatgcctataagcaggaccag
tcgagcaaagcactgcgtaatcgcctcatggagaactatctcccgctggtgcgatataac
gcagagcgagtgtggtccaagcttccggatggcgtggatatcaacgacctgatttccgct
ggagtcttcggactcatggatgctattgaagcattcgatatggagcgcggagttaagttt
gaaacctactgtgtcccgcgaattcgtggagccatgctcgacgaactccggaccatggac
tgggttccgcgacttgtgcgcagcaaagccagcaagctggaatccgcccgcaagcaggcc
gaagccgaactcggcagacctcctgctgataatgaagttgctgccaagatgggcgtccct
ctggatgagtacgaaaaactcaagagcgaagccagtgctgttaatctcgtcagcctgaac
aagaaatggtacgagaccgatagctataaagatgttcgtgaaatcgacatcattgaagat
actaaaggcgaagacccgactctcagcatccagaagcgtgacctgatgaaactggtcacc
aaaggtcttaaccgcaacgaacgcctgattatcattctctactattacgaagagttgaca
atgaaggaaattggcagcactttagggctgtcagaatcccgcgtgagccagatgcattcg
agtatcgtcaaccgactcaaagaacagcttggccgccgcaaaccggagtttgctcagtaa
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