Planctopirus ephydatiae: Spb1_18920
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Entry
Spb1_18920 CDS
T06220
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh03420
Nucleotide excision repair
peh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Spb1_18920 (pcrA_2)
03430 Mismatch repair
Spb1_18920 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_18920 (pcrA_2)
Enzymes [BR:
peh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spb1_18920 (pcrA_2)
DNA repair and recombination proteins [BR:
peh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spb1_18920 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Spb1_18920 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDV29965
UniProt:
A0A518GMT2
LinkDB
All DBs
Position
2334796..2336838
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AA seq
680 aa
AA seq
DB search
MLDISHLNRPQQEAVRTHRGPLLVLAGAGTGKTRVITYRMADLIAAGVDPERILSVTFTN
KAAREMLDRTSLLLGRTMKKRPTISTFHSWCVGILRQEIDSLGYPKQFVIYDRGDQESAA
RKALQVLKMTDTALKPGDLLAQISRWKMQGVTPDLAQEIADSDHEQLAGMAYRRYQLALK
AAGGVDFDDLLFLTWQLFKHHPDTLERQQNRFDFVQIDEYQDTNELQFRLIEAIVRRHQN
LCVVGDDDQSIYGWRGAEVKHILGFKQSFPAAKVVRLEDNYRCTESIIQLANQLVAHNRG
RHEKRLIAHRGGTSVVFREYPDEQAEAEGVVRDIAYLIHQLNVRPCEIAILFRTNEQPRI
FEHELRRKQIHYRIVGGQSFFDRKEIKDLQAYLKVLVNPRDDLSLLRIINVPPRGIGDAT
CERLLARAVKEKRRFWDVIPDAAAAGEITSKALNNLRQFEQQMSGLREAFKQPGVKLSET
FLRMVETTGYAREIERTYKSAEQQEMRNLILGEFANAVSQYESQSRSPSLEGYLDEISLG
GSDFAAPERPDENAITLMTLHSAKGLEFERVYLVGLEEGILPHKRSVDEEFENPSSVEEE
RRLCYVGITRAKDFLTITRSQSRVKWGKKRETKPSRFLKEMRTAIETTAAPEGAGIDPAA
RSRTTGGGRTSHPAPHGEML
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgctggatatctcgcatctgaatcgcccacagcaggaggccgtgcggacacatcgcggg
ccacttctggttctggcaggcgctggaactggcaagacacgagtcattacctatcgcatg
gccgatctgatcgctgctggtgttgatcctgagcgaattctttcggtgacgttcaccaat
aaagctgccagggaaatgctggatcgaacgtctttactcttaggtcgcaccatgaaaaag
cggcccacaatctcgacgtttcacagttggtgtgtgggcattctgaggcaggaaattgat
tcactgggatatcccaaacagtttgtgatttatgatcgaggagatcaggagtcagcggca
cgaaaagcacttcaagttctcaagatgaccgatacggctttgaaacccggagatcttctc
gctcagatcagtcgctggaagatgcagggagtcacgcccgatctcgcgcaggagattgcc
gattcggatcatgagcaactggccggcatggcttaccgcaggtaccaactggcgctcaag
gcggctggcggagtcgattttgatgacctgctgtttctgacgtggcaattgttcaaacat
catccggatactcttgaaagacagcagaatcgattcgactttgtgcagattgatgaatac
caggatacaaatgaactgcagtttcgattgatcgaagccatcgtgagacggcaccagaat
ctctgtgtggtgggtgatgatgaccagtccatctacggctggcgcggtgccgaggtgaag
catattcttggttttaagcagtcatttcctgcagcaaaagtggtgcggctggaagacaat
tatcgctgcaccgaatcgattattcagttggccaatcaactcgtcgcccataatcgtggt
cgtcatgagaaacgattgattgctcatcggggtggaacatcggtggtgttccgggaatat
cccgatgaacaggcagaagcggaaggcgttgtgcgggatattgcttatctgattcatcag
ctcaatgtcaggccctgcgaaatcgcgatcctctttcgcaccaatgagcagcctcgaatt
ttcgagcatgaacttcgccgcaagcagattcattatcgaattgtgggtgggcaatccttc
tttgatcgcaaggaaatcaaagacctgcaggcttatttgaaagtgctggtcaatccacgg
gatgatctttcgttactgcggattatcaacgtgccgccgcgcgggattggtgatgcgacc
tgtgagcgtttactggccagagctgtgaaagaaaaacgtcgattctgggatgtgattccg
gatgcggctgccgctggggaaatcacatcgaaggcactcaataacttgcgacagtttgaa
cagcagatgtcgggtttgagagaagcctttaaacaacccggcgtcaagttaagcgaaaca
ttcctgcggatggtcgagaccactggttacgcccgtgagatcgagcgaacctataaatca
gccgagcagcaggaaatgagaaatctgattctgggtgagtttgcgaatgcggtttcgcaa
tatgagtcccagtcgaggtccccttcactggagggatatctcgatgaaatttctttggga
ggatctgattttgctgcccccgaacgacccgatgaaaatgcgattactctgatgactttg
catagtgccaaaggtctggagtttgagcgggtttatcttgtggggttggaagagggcata
ttgccacacaaacgcagtgtcgatgaagagtttgaaaatccatcctctgtcgaagaagaa
cgtcggctctgttatgtgggaattacgcgggcgaaagattttctgacaattacccgttcg
cagagccgggtgaaatggggcaagaaacgcgagaccaagccatcacgatttttgaaagaa
atgcgaactgcaatcgaaaccaccgccgctccggagggagcgggcattgatcccgcggct
cgatcccggacaacaggtggcggacgaaccagccatcctgccccacatggagaaatgttg
tga
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