Planctopirus ephydatiae: Spb1_19790
Help
Entry
Spb1_19790 CDS
T06220
Symbol
csd_2
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00450
Selenocompound metabolism
peh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Spb1_19790 (csd_2)
Enzymes [BR:
peh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Spb1_19790 (csd_2)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Spb1_19790 (csd_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SelA
ASL_C2
Motif
Other DBs
NCBI-ProteinID:
QDV30052
UniProt:
A0A518GN28
LinkDB
All DBs
Position
2438593..2439897
Genome browser
AA seq
434 aa
AA seq
DB search
MSVSPTSTGQQPGILDFDRIQQVRQNFPILHELVHGDLPLVYLDSAATSQKPKCVVDKIV
EAYEKYNSNVHRGIHALGDRMTTEMESAREKIARFIGASTAEQVIFTSGTTMSVNLVAHG
WAARHLRPGDEILLNEMEHHANFVPWQMAAQASGATLRFLPLTVDWQLDLSRLDEFINSK
TRLVAVAGMSNVTGTIHDVSRIADAAHAVGARVFVDAAQSAAHGLTNVQTGNIDFLAFSG
HKLLGPTGLGILYGKPDALGEIQPVFGGGHMIREVTKSGSTWADLPARLEAGTAAFVECA
GMGAAIDYLESIGMESLARYEHSLLELAHARLSQIPGLTIFGPEVAHKGAIVSMVHEQIH
AHDLADLLDRQGVAIRAGHHCTMPLHELFGVAATARASFAFYNTPDEVEKLASAIEKAIE
VFQRRSHRRANRSL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctctccgacctccactgggcagcaaccgggaatcctggactttgatcgaatt
cagcaagttcgacaaaactttcccattcttcacgagttggtgcatggcgatctgccactg
gtttatctcgactcagccgcgacatcccagaagccaaaatgtgtggttgataagatcgtt
gaagcctacgagaaatacaattcgaatgttcaccggggcattcatgccctgggtgatcgc
atgacgaccgaaatggagtcggctcgcgaaaagattgctcgattcatcggtgcttcaaca
gccgagcaggtgatttttacctcagggacgacgatgtctgtcaaccttgtggcgcatggc
tgggcagccaggcatctacggcccggtgacgagattctgcttaacgagatggagcatcac
gcgaactttgttccttggcagatggcagcgcaagcttctggggccacactgaggtttctc
cctctgacagtggattggcagctcgatttgtctcggctggatgagtttatcaacagcaaa
acacggcttgtcgctgtagcggggatgtcgaatgtcactgggacgattcacgatgtttct
cgaatcgcggatgctgcccatgctgtgggagcacgcgtgtttgtcgatgccgctcaaagt
gctgcacatggcctgacgaatgtccaaactggaaacatcgattttctagccttctcaggc
cacaaacttctcgggcccacaggtcttggcattctgtatgggaagccagatgccctcgga
gagattcagccggtctttggtggtgggcacatgatccgggaggtcacaaaatctggctcg
acgtgggccgatcttccggcacgtctcgaagcggggacagcggcctttgtcgaatgtgca
gggatgggggcagcaattgactatctggaatccatcggtatggagtcgcttgcccgatac
gagcattcgctcctcgaactggcacatgctcgcttaagtcagattcctggtctcacgatc
tttggtcccgaagtggcccacaaaggggcgattgtgagtatggtccacgagcagattcat
gcacacgatctggccgatctactggacaggcaaggcgtggcgattcgcgccggccatcat
tgtacgatgcctttgcatgaactctttggtgtggctgctacagcacgggccagtttcgct
ttctataacacgccagatgaagtggaaaaactcgcttctgccatcgaaaaggcgattgaa
gtcttccaacgacgctctcatcgtcgtgccaatcgatccctttga
DBGET
integrated database retrieval system
