Planctopirus ephydatiae: Spb1_21300
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Entry
Spb1_21300 CDS
T06220
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_21300
Enzymes [BR:
peh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Spb1_21300
DNA repair and recombination proteins [BR:
peh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Spb1_21300
Prokaryotic type
Spb1_21300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Methyltransf_3
DUF7239
Motif
Other DBs
NCBI-ProteinID:
QDV30202
UniProt:
A0A518GNI8
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All DBs
Position
2632694..2634175
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AA seq
493 aa
AA seq
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MAFVPEAPSSRVWQLNSHPLRKSGQYVLYWMISARRLQWNFGLQQAVHRAQTLNLPLVIL
EPIGCRAKWSSVRFHHFVLEGMAEHHTLCQERGIAYHPYVEPEPGHGVGLVEAYAQKAAA
VITDDFPCYFLPRMVQTLGQRIDVLLECVDSNGLFPMRVTDQVFTTAHAFRRFLQKNIKP
YLSEFPVADPLAGPILSMEIPSHIARKWSPANPGLLNRDASALAQLPIDQTVGPAAFRGG
LKASQEAVARFFKSRLSRYADDRNNPEQEAASGLSPYLHFGHVSAHEIFSRLVAKESWKP
ELLPEKASGSREGWWQMSSAAEAFLDELITWREVGYNFTSHREDYDQYESLPAWARQSLE
KHAGDHRPSIYDLHQLETAQTHDELWNAAQRQLVREGRMHNYLRMLWGKKVLEWSLTPQQ
AVETLIHLNNKYAVDGRNPNSYSGIFWVFGRYDRAWGPERPIFGTIRYMSSDNTARKLPV
KDYLKRYAASSGK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgttccagaagctccctcaagtcgtgtttggcaactcaattctcatcctttg
agaaagagtggacagtatgtgctttactggatgatttcggcccggcgactccagtggaat
ttcggtttgcagcaggccgttcacagggcgcaaacgttaaatcttccactggtcattctg
gagcccattggctgccgggcaaagtggtcgtctgttcgatttcatcactttgtccttgaa
gggatggctgagcaccatactctctgtcaagagagggggatcgcctatcatccttatgtc
gaacccgaacccgggcatggcgttggtctcgttgaagcttatgctcaaaaagcagcagca
gtgatcaccgatgattttccctgctatttcctgcccagaatggttcaaactttagggcaa
agaatcgatgtcttgctggagtgtgtcgacagcaacgggttattcccgatgcgagtgaca
gatcaggtcttcactacggcacatgctttccggcgcttcctgcaaaagaatatcaaacct
tatctttccgagttccctgtggccgatcccctggcaggcccgattctctcgatggaaatt
cctagtcacattgctcgaaagtggtcgccagccaaccctggcttgctcaatcgggatgcc
agtgctctcgctcaactgcccatcgatcagaccgttggacctgccgcgtttcgtggtggg
ctcaaggcttctcaggaggctgtcgcacggttcttcaaatcgcgtttgtcgcgttatgcc
gatgatcggaacaaccctgaacaagaagcggccagcggattatcgccttatcttcacttt
ggccatgtctctgctcatgagatcttttcgcgacttgtggccaaggaatcatggaagccg
gagcttctcccggaaaaagcttcaggaagtcgggaaggctggtggcagatgtcctcagcg
gcggaggctttcctcgacgaactgattacctggcgagaagtgggctacaatttcacttcg
catcgggaagattacgatcaatatgagtcgttgccagcctgggcgcggcaatctttagaa
aagcatgcgggtgatcatcgaccatccatctatgatctgcatcagcttgagacggcacaa
actcatgatgaactctggaatgcggcccagcgacaactcgtccgcgaaggtcgaatgcac
aattacctgcggatgctctggggcaaaaaagttctcgaatggtcgctcactccgcagcag
gctgtcgagacgctgattcacctgaacaataaatatgctgtcgacggacgaaatccgaat
tcctattcgggaatcttctgggtcttcggtcgatacgatcgagcctggggaccggaacgt
ccaatctttggcacgatccggtatatgagttcggacaatacggctcgcaaacttcccgta
aaggactatctcaaacgctatgccgcatcctcgggaaaatag
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