Planctopirus ephydatiae: Spb1_22480
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Entry
Spb1_22480 CDS
T06220
Symbol
ruvB_2
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spb1_22480 (ruvB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_22480 (ruvB_2)
Enzymes [BR:
peh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spb1_22480 (ruvB_2)
DNA repair and recombination proteins [BR:
peh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Spb1_22480 (ruvB_2)
RecFOR pathway proteins
Spb1_22480 (ruvB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA
AAA_lid_4
AAA_5
Rad17
AAA_16
nSTAND3
Cdc6_lid
Mg_chelatase
AAA_3
TrmB
Sigma54_activ_2
NPHP3_N
bpMoxR
AAA_assoc_2
RNA_helicase
AAA_7
DUF815
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QDV30319
UniProt:
A0A518GP58
LinkDB
All DBs
Position
complement(2774776..2775717)
Genome browser
AA seq
313 aa
AA seq
DB search
MNHEVNDIKPSSLSHIVGQRSVVEQVRVALDACFQDNRRMDHCLMVGPPGLGKSVTASIV
AQEMATDFHEVLGQSIAAPADLNALLLLAKEKSVIHIDEAHELKKEYQTCLYLALDQKKL
LLPGGKNVQSLPLNDFTLLLSTTDEYCLLQPLRDRMRLVLRFEFYSVDELTTVLKHRTKC
LRWEIDEAVLPLIAQRARGTPRLALRLLQACYRVCRSLGEAAITQEHLSRACQLENVDGL
GLGPIEQKYIAILADGPKRLNVISSLLGLPSRTISQVTEPFLIRAGLVIKDDQGRRQLTT
LGHQHASSLKSGF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgaagtgaatgacatcaagccatcgtccttgtcgcacatcgttgggcagagg
tcagtggtcgagcaggtgcgagtggcgctcgatgcctgctttcaggataatcggcgcatg
gatcactgcttgatggttggcccaccgggtcttggcaaatcagtcaccgcttcaattgtt
gctcaggagatggcgaccgacttccacgaggtcttggggcaaagcatcgctgctcctgct
gacctgaatgcgttgctgcttttggccaaagagaaatcggtcatccacatcgacgaagcc
cacgaattgaagaaggaataccagacctgcctctatctggcgctcgatcaaaagaagttg
ctgctacccggtggcaagaatgtgcagagcttgccgctgaacgacttcacgctcttgctc
agcaccacggatgaatactgcctgctgcaaccattgcgagaccggatgcgtttggtcctt
cgattcgagttctacagcgttgatgaactgaccacggtcttgaagcaccgaacgaaatgc
ctgcgatgggagatcgatgaagcggtgctgccgctcatcgcacaacgagcaagaggcaca
ccacggctcgctcttcgtctgctgcaagcctgttatcgggtctgccgaagtttgggcgaa
gcggcgatcacgcaagaacacctgagccgtgcctgccaactcgaaaacgtcgatggtctt
ggacttggccccatcgagcagaagtacatcgccatccttgccgatgggccgaagcggctg
aacgtgatttcgtcgctgctgggtttgccaagccgaaccatcagccaagtgacggaaccg
tttctgattcgtgcggggctggtcattaaggatgaccaaggtcgtcgccaactgaccacg
ctggggcatcagcacgcttccagcctgaaatctggcttctga
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