Planctopirus ephydatiae: Spb1_22570
Help
Entry
Spb1_22570 CDS
T06220
Symbol
pcrA_3
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh03420
Nucleotide excision repair
peh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Spb1_22570 (pcrA_3)
03430 Mismatch repair
Spb1_22570 (pcrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_22570 (pcrA_3)
Enzymes [BR:
peh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spb1_22570 (pcrA_3)
DNA repair and recombination proteins [BR:
peh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spb1_22570 (pcrA_3)
MMR (mismatch excision repair)
Other MMR factors
Spb1_22570 (pcrA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Cas_Cas4
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDV30328
UniProt:
A0A518GNX7
LinkDB
All DBs
Position
2784211..2787030
Genome browser
AA seq
939 aa
AA seq
DB search
MTTKLTIATVEESPQTGGSGSSFVLSPEQEKVVNHRGGHLQVIACAGAGKTEAISRRVAS
LILDGAEPSQIIAFTFTDRAAQSLKTRITKRIAEAKGPAFLDRLGPMFVGTIHSYCLRML
QDHVPEFGNFDILDENRLAGLLSREHKRLELSKLGNQHWRPIFDFLRNADVVENELIDGG
LMKGTPFGDCYLAFKQTLYRYHFLTYGLLISAAVKALSRLEVANRVRANLRYLIVDEYQD
VNPAQEKLISLLAQDPVQLCVVADDDQSIYQWRGSDVSNMLDFRKRYSPATSLTLSVNRR
CRPKIISSANAFATSIAPRLTKKMEPHRQPGGPEVHGWAAETDAAEAVTIADTIERLRGE
GFRYKDIAILYRSVRTASPPLIEEFKKRDIPFRCAGRTGLFLQPEASALGKLYALLSGNE
WKSERYGESQSVDLDDVDHEFAAAFNEGETIPDLRPYLQDWQAMVKDNTAQVNLVRDYYR
LLRLVGVNTLDLDDPADSARMGTLARFSQILADFEHVTRRARYVDEQGQQIFRGGQDRGI
YFYQRLYNYLQYYALDAYEDFEGEDTFDLDAVDILTVHQSKGLEWPVVFLPSLVEGRFPS
RYAGQSQDWLLPESVFPASVRKRYEGSDTEERRLFYVALTRAKDVVYLSRFRRKTNKFKP
SPFLLEIVGSDPELAEQLPLPPTFTPSAESGDELPTVSFSELASYEGCPLKYRFSSSLGF
QPQLVAELGYGRAIHHILRHIAEATKAKQQLPTLEEVEKVFAKEFYLPFANNAAFHNLLD
RARSLVGKYLSDYSGELLRVWETERPFELHLEKGVVNGRADVILDREGGVVGNLGIVDYK
TANDAKSDDVFAFQLAIYAAAGRGEGLDVKAAYLHALKESVRKNVPVDNVAISVARKRAD
TLIEGIVAAEFPPRPELSKCKVCDMRAICKHAQCSKYDL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaagttgacaatcgcaacagtcgaagaatctccgcaaaccgggggtagcggg
tcgtcgtttgtcttgtcccctgagcaagaaaaagtcgtcaaccaccgtggcgggcatctt
caggtgattgcctgtgccggtgccggaaaaaccgaagccatctcccgaagggtggcatcg
ctgatccttgacggggccgagccttcccagatcatcgccttcacgttcacggatcgggct
gctcagtcactcaagacacgaatcacgaagcggatcgctgaagccaagggaccggcattc
ttggatcgcctcggccccatgttcgtggggacgatccactcgtactgcctgcgaatgctt
caggatcacgttcccgaattcggcaacttcgacattctggacgagaaccgactggcggga
ctgcttagccgggaacacaagcggctcgaactcagcaagttggggaaccagcactggcga
ccgatcttcgactttctgcgcaacgccgacgtggtggagaacgaactgatcgacggtggg
ttgatgaagggtacgccgtttggcgactgctacctcgccttcaagcaaaccctttaccgt
tatcatttcctaacctacggcctgttgatctcagcggcggtgaaagccctttcccgactg
gaagtggctaatcgggtccgagccaatctgcgatacctgatcgtggacgagtatcaagac
gtgaacccggctcaggaaaaactgatttcgcttctggctcaagaccccgtgcagttgtgc
gtggtcgctgacgatgaccagtcgatttaccagtggcgtggttccgacgtttccaacatg
ctcgacttcaggaaacgctattccccggcgacctcgctgacgctttccgtgaatcgccgc
tgccgcccgaagatcatcagttcggccaacgcctttgcaacatccattgcccctcggctc
acgaagaaaatggaaccgcaccggcaaccgggcggacctgaagttcatggctgggccgca
gaaaccgatgcagccgaagcagtcacgattgcagataccatcgagcggctaaggggagag
gggtttcggtataaggacatcgccatcctttaccgctctgtccgaaccgcctcaccgccc
ttgatcgaagaattcaagaagcgggacattcccttccgctgtgccgggcgcacgggcctg
ttccttcaacccgaagcctctgcccttggaaagctctacgccttactcagcggcaacgag
tggaagagcgaacgctacggtgaatcgcaatcggttgacctcgatgatgtggaccacgag
ttcgccgccgccttcaacgaaggggaaacgattcccgaccttcgcccgtacttacaagac
tggcaggcgatggtcaaggacaacacggctcaggtaaaccttgtccgtgattactaccgt
ctcttgcggctggtcggcgtcaatactcttgatctggatgatcccgccgattccgcccgc
atggggacgctggcccgcttctcgcaaatccttgccgactttgaacacgtcactcgccgg
gcaaggtacgttgacgagcaaggtcagcaaatctttcgtggcgggcaagaccggggcatc
tacttttaccagcggctctacaactaccttcagtattacgctctcgatgcctacgaagat
tttgaaggggaagacaccttcgatctggatgccgtggacatcctgacggtgcatcagtcg
aaggggttggaatggcccgtggtgttcttgccgagcttggttgagggccggttcccctca
cgctacgccggtcagtctcaggattggctgttgcccgaatcggttttccccgcctccgtt
cgcaagcgatacgaaggcagcgatacagaggaacgccgacttttctatgttgcgctcacc
cgtgctaaggatgtggtttacctctcccgcttccgccgcaagacgaacaagttcaaaccg
tcgccgtttctcttggagattgttggctctgaccctgaactcgccgaacaacttcccttg
ccgccgacattcacgccttctgcggaatctggcgatgagttgcccaccgtgtccttttct
gaactggcttcctacgaaggatgcccgctcaagtaccgattcagttcgtcgctgggcttt
caaccgcaactggtggctgaactcggttacggtcgtgccatccaccacattctgcggcac
attgccgaggcaacgaaggccaagcaacaacttcctacgcttgaagaagtcgagaaagta
ttcgccaaagagttctaccttcccttcgccaacaacgccgcatttcacaacttgctcgac
cgggccagatcgctcgtcggcaagtacctctcggattacagcggcgaattgcttcgggtc
tgggaaacggaacggccttttgaattgcacttggaaaagggcgtagtgaatggccgggcc
gatgtgatcctcgaccgtgaaggtggtgtcgtcggcaatcttgggatcgtggactacaag
acagcgaacgatgcaaaatcggacgacgtgttcgcctttcagttggcgatttacgccgct
gcggggcgtggtgaagggttggacgtgaaagcggcttaccttcacgctctgaaggaaagt
gtcagaaaaaacgtgccggttgataacgtggcaatcagtgtggcacgcaagcgggcggac
acattgatcgaagggatcgtagccgctgagttcccgccacgccctgaattgtctaagtgc
aaggtgtgcgacatgcgggccatttgcaaacacgctcaatgcagcaagtacgacctttga
DBGET
integrated database retrieval system
