Planctopirus ephydatiae: Spb1_23560
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Entry
Spb1_23560 CDS
T06220
Symbol
hemB
Name
(GenBank) Delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00860
Porphyrin metabolism
peh01100
Metabolic pathways
peh01110
Biosynthesis of secondary metabolites
peh01120
Microbial metabolism in diverse environments
peh01240
Biosynthesis of cofactors
Module
peh_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Spb1_23560 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peh04147
]
Spb1_23560 (hemB)
Enzymes [BR:
peh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Spb1_23560 (hemB)
Exosome [BR:
peh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Spb1_23560 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QDV30423
UniProt:
A0A518GP72
LinkDB
All DBs
Position
complement(2912314..2913360)
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AA seq
348 aa
AA seq
DB search
MSASTRPDGGFFGSSPFQGQFPQTRLRRNRQSTWSRALTQEKHLHVSNLIWPVFVIDGAN
HEEEVASMPGVFRRTIDRLLPALQEAETLGIPAVAIFPVTESRLKDPEGTEAINPENLVC
RTVRAIKEAGLSLGVICDVALDPYTSHGHDGILRNGVIVNDETVARLCQQAVVQAQAGCD
VIAPSDMMDGRIGAIRNALDEAQFQHVQLLSYAAKYASAFYGPFRDAVGSASQLGQGDKK
TYQMNPANTDEAIREVAMDLAEGADMIMVKPGMPYLDIVHRVKATFGVPTFAYQVSGEYS
MIAGAAEKGWVNRELVMLESLLAFRRAGADGILTYFAVEAARRLKNIQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttccacaagaccagatggtggatttttcgggagcagcccgttccaagggcag
tttcctcaaactcgcctgcgccgcaatcgccaatcgacgtggtctcgggcattaacacag
gaaaaacatctgcatgtcagcaatctgatctggcccgtcttcgtgattgatggagccaat
catgaggaagaagtcgccagtatgccgggagtcttccgaaggaccattgatcggctgctg
ccggccctgcaggaagcagagacactgggaataccggctgtggccatctttcctgtgacg
gaatcacgattgaaagatcctgaaggaactgaagcgatcaatcctgaaaatctcgtctgc
cggactgtccgcgcgatcaaagaggcggggctttcactgggagtgatctgtgatgtggcc
cttgatccttatacatcgcatggtcatgacggaattctgcgtaacggggtgattgttaac
gatgagacggtggctcgactctgccagcaagcggttgttcaggctcaggcaggttgtgac
gtcattgctccgtcggacatgatggatggccgcatcggtgcgatccgcaacgcactggat
gaggctcaattccagcatgtgcaattactctcatatgccgccaagtatgcctcagcgttt
tacgggccatttcgtgatgctgtcggatcggcttcacaattgggacagggtgacaaaaag
acctaccagatgaatcctgctaatacggacgaggcgattcgcgaagtggcgatggatctc
gccgaaggggctgacatgatcatggtcaagcccggcatgccgtacctggatattgtccat
cgagtgaaagcgactttcggcgtgcccacatttgcttatcaggtcagtggtgaatattcg
atgatcgctggtgccgccgagaaaggttgggtgaaccgggaactggtgatgctggaaagt
ctactcgcatttcgccgggcgggtgcggatggaatcctcacttatttcgcggtcgaagca
gctcgccgactgaaaaatattcaatga
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