Planctopirus ephydatiae: Spb1_24310
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Entry
Spb1_24310 CDS
T06220
Symbol
xylR_3
Name
(GenBank) Xylose operon regulatory protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
peh03000
]
Spb1_24310 (xylR_3)
Transcription factors [BR:
peh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Spb1_24310 (xylR_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
HTH_18
HTH_AraC
TetR_N
HTH_31
HTH_IclR
HTH_Crp_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QDV30497
UniProt:
A0A518GPE7
LinkDB
All DBs
Position
complement(3020512..3021387)
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AA seq
291 aa
AA seq
DB search
MADVPGLGWSCPVVWGERGFRHFAWCEFFRKPRVWIDQRREQFQQLVAEVGSTCSLFRDK
RSMPRDATWSQHDLQEPIDWLNQLPRPVAILACDDERAHLVLDAALTLGLRVPEDAAFMG
IDNDEVFGRVSSPPLSSVDVNAVAVGYKAAEVLARRMKGRRVPARTMMPPRGVVTRQSMD
IVAVDDPEAAAALRFIREHACQPVTAEDVAAHLAVSRSTLDRCLHAAVGHSATVAIMQTR
LASVKSDLAETDLSLQAIASRAGFASVQHLANLFRERVGVTPERYRRDMRH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatgtgccgggcctgggttggtcgtgtcccgtggtctggggcgaacgcggcttc
cgacatttcgcatggtgcgaattctttcgtaagccgcgagtctggatcgatcagcggcgt
gagcagttccagcaactggttgccgaagtcggatcgacctgcagtctgtttcgcgacaag
cggtccatgccgcgagatgccacctggtcgcaacacgacctgcaggaaccgatcgactgg
ttgaaccagttaccgcgtccggtcgcaattctcgcctgtgacgatgaacgggcacatctg
gtacttgatgctgcgttaaccttaggcttgcgcgtaccggaagacgcagccttcatggga
atcgataatgatgaagtcttcggccgtgtctccagtccgccgctgagcagcgtggacgtc
aacgcagtggccgttggatacaaggctgccgaagtgcttgccaggcgaatgaagggacgc
cgcgttcccgcacgaacgatgatgccacctcgcggtgtggtgacgagacagtcgatggac
atcgtcgccgttgatgacccggaagccgctgctgcactacgattcattcgcgagcatgcc
tgtcagcctgtaaccgccgaagatgtcgccgcacatcttgctgtctcccgcagtacgctc
gatcgctgtctgcacgcagcggtgggacattcggcaaccgtcgcgatcatgcagactcgg
ctagcgagcgttaagtccgatctcgccgaaacggatctctcactacaggcgattgcgtct
cgagccggattcgcctccgttcagcatctggccaatctctttcgagaacgagtcggcgtc
accccagagcgctatcgccgggacatgaggcattag
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