Planctopirus ephydatiae: Spb1_26250
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Entry
Spb1_26250 CDS
T06220
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00300
Lysine biosynthesis
peh00470
D-Amino acid metabolism
peh01100
Metabolic pathways
peh01110
Biosynthesis of secondary metabolites
peh01120
Microbial metabolism in diverse environments
peh01230
Biosynthesis of amino acids
Module
peh_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Spb1_26250 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Spb1_26250 (lysA)
Enzymes [BR:
peh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Spb1_26250 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDV30691
UniProt:
A0A518GQD4
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All DBs
Position
complement(3275762..3277036)
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AA seq
424 aa
AA seq
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MNPFQYRDGELFCEEIPVSRIARDFGTPCWIYSKAMLLHQLGQIQNAFAAVNPVICFSVK
ANSNLGILKVMRDAGSSFDVVSGGELYRVRKAGADTAKVVFAGVGKTDAEIQLALENQIL
MFDVESEPELDAIAAVAEKMGVIAPVALRLNPDIDAKTHAKTTTGKKGNKFGMDIERVFE
LADKVLKTPRLKLVGIHMHLGSPILTTEPYDLAGQKAIEVTRDLRARGHEIGWVNLGGGF
GISYRGSEGLPASEYAKVIVPAVQEMGVQLALEPGRFITGNAGILVSEVVYTKREGGKLF
VIQDAAMNDLMRPAMYDAFHKIWPVKAAAEPANYEGEIEGCEACDVVGPVCESGDYFAKG
RYLPPVQRGDLISIFSAGAYGTSMSSNYNSRPRAVELLIDKGHVQVVRRRETYDDLIAAE
MDVE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttccagtaccgtgatggtgaattgttttgcgaagagatccctgtttctcga
attgcccgtgactttggcaccccctgctggatttattccaaagccatgctgctgcaccaa
ttggggcagattcaaaatgcctttgcggctgtcaatcctgtcatctgcttctcagtcaag
gcgaactcgaacctgggtattcttaaggtgatgcgggatgccgggagcagcttcgacgtg
gtttctggtggcgaactttaccgcgtaagaaaagccggagccgatacagcgaaggtggtg
tttgcaggtgtcggcaagactgatgccgagattcagttagctctcgaaaatcagattctg
atgttcgatgtcgaaagcgaaccagaactggatgccatcgctgcagtggctgaaaaaatg
ggggtcattgcccctgtggcgttacgtctgaatcctgacatcgatgcaaaaacccacgcg
aaaaccaccacgggcaaaaagggcaataaattcgggatggatatcgaacgggttttcgaa
ctggccgacaaagttttgaagactccccggttgaaactcgtcgggattcacatgcatctg
ggttctcctattctgacgacagaaccctacgatctggctgggcagaaggccattgaagtg
acgcgcgatcttcgtgctcgtggacatgagattggctgggtgaatctgggtggcgggttt
ggcatcagttatcggggaagcgaaggcttgcctgcttctgagtatgccaaagtgattgtg
ccagccgttcaggaaatgggtgttcagctcgctctggagccgggccgcttcatcactggc
aatgctggtattctcgtcagcgaagtggtctacaccaaacgtgaaggtggcaaactcttc
gtgattcaggatgcggctatgaacgatctcatgcgtcctgcgatgtacgatgccttccat
aaaatctggccagtgaaggctgcagccgaaccggctaactatgaaggcgaaattgaagga
tgcgaagcttgcgacgtcgttggcccggtgtgtgaatcgggcgattacttcgccaaggga
cgttatttgccgccagttcagcgcggtgatctgatcagcattttcagtgccggtgcttat
gggacatccatgagcagtaactacaactcccgccctcgtgcggtcgaattgctcattgat
aaaggtcacgtgcaggtggtccgtcgtcgcgagacctacgacgacttaattgccgccgag
atggatgttgaataa
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