Planctopirus ephydatiae: Spb1_28200
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Entry
Spb1_28200 CDS
T06220
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Spb1_28200 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_28200 (xseB)
Enzymes [BR:
peh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Spb1_28200 (xseB)
DNA repair and recombination proteins [BR:
peh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Spb1_28200 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Sec8_N
CENP-F_leu_zip
Motif
Other DBs
NCBI-ProteinID:
QDV30885
UniProt:
A0A518GQJ4
LinkDB
All DBs
Position
complement(3538940..3539395)
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AA seq
151 aa
AA seq
DB search
MARKKSSSSTEGPSFEEALEELQGIVDQLDEGQLPLNDALQGFERGIHLYRVCSEILENA
ESKVEMLKSQLKGSGPEAIPVDSIIKSTIDSSVEKAPPMSSDRTEATLSRVPATEPEAPF
DADPGRGTEQLYSEDSMRSEDNSPRPNAGLF
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaaaaaatcgtcatcatcaacggaaggcccctcttttgaagaggcccttgag
gaacttcaagggattgttgatcagttggatgaaggccagttaccactgaatgacgctctt
caagggtttgagcggggcattcatctgtatcgggtttgcagcgaaattctggagaatgct
gaatcgaaagttgagatgctgaagtcgcaactgaaaggatccgggccagaggcaattccc
gtcgattccatcattaaaagtaccattgattccagcgtcgagaaggctccgccgatgtcg
tcagatcgcacggaggccaccttgagccgtgttccagccacagagccagaggcacctttt
gatgccgatccaggacgtggtactgaacaactttattcagaagattcgatgagatctgaa
gataactctcctcgccccaatgcagggctgttttaa
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