Planctopirus ephydatiae: Spb1_29190
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Entry
Spb1_29190 CDS
T06220
Symbol
rsmH_2
Name
(GenBank) Ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peh03009
]
Spb1_29190 (rsmH_2)
Enzymes [BR:
peh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
Spb1_29190 (rsmH_2)
Ribosome biogenesis [BR:
peh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Spb1_29190 (rsmH_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
GCD14
Motif
Other DBs
NCBI-ProteinID:
QDV30983
UniProt:
A0A518GQV2
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All DBs
Position
3666395..3667375
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AA seq
326 aa
AA seq
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MGNFSAGNASTPDAEPAGPGKKNSSQRAVHLPVMLREVIQHLQLESGLVVADGTLGAGGH
SREILKAIGSAGMLLAFDRDPMMISLAEKIVCGENVHIHHGSYIEIRDVLQRHSQSTGRP
PLVDRMLLDLGYSSDQLADRQRGFSFQTEGPLDLRFSTSENVSAAQWLATAHDSQIVRVL
TEFGEEPFAERLGPAISLAARRGEIQTTKDLVRVVEQTVPPAILRNAEKHPATRVFQALR
IQVNDELTHVSTMLNQIAPEVLAPRGIMAVITFHSLEDRLVKQAFRQKNLWEEVTDKPIV
PTPAEIRFNPRSRSAKLRVARRVPGQ
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttgggtaatttttcggcgggaaatgcttcgactcccgacgcagagcctgcggggcctggc
aagaaaaactcgtcccagcgggctgtgcatctgcccgttatgcttcgagaagtgattcag
catctccaactcgaatcaggactcgtggtcgctgacggaactctcggggcaggggggcat
agtcgagagattttgaaagccatcggatcagcagggatgctgctcgctttcgaccgcgac
ccgatgatgatttcgttggcagagaaaattgtgtgtggagaaaacgtccacattcaccac
ggaagttacatcgaaatccgggatgtgctccagcgtcacagtcagtcaactggtcgtcca
cctctcgttgatcgcatgcttctcgacctggggtactcttccgaccaactggcagatcga
cagcgcggcttcagctttcagacagaaggaccactcgatctgcgtttctcaaccagtgag
aatgtttccgctgcccagtggctggccacggcccatgattcgcagattgttcgagtcctg
acagagttcggcgaagaaccttttgcagagcgattagggcctgcaattagtcttgcggcg
cggcggggcgaaatacaaacgacgaaagacctggtgcgtgttgtcgagcagacagttcct
ccagcgattttgcgaaatgccgagaagcacccggcaacacgcgtttttcaggccctgcgc
attcaggtgaatgatgaactcacgcatgtttcgaccatgttgaaccagatcgcaccggag
gtattggctcctcgcggaatcatggcagtcattaccttccattcgctggaagatcgactg
gtcaaacaggcctttcgacaaaaaaacctatgggaagaagtgacagataaacccattgtg
cccactccagccgagattcggtttaatccccggagtcgatcagcgaaactgagagttgcc
cgaagagttccgggtcagtga
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