Planctopirus ephydatiae: Spb1_29620
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Entry
Spb1_29620 CDS
T06220
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00260
Glycine, serine and threonine metabolism
peh00460
Cyanoamino acid metabolism
peh00630
Glyoxylate and dicarboxylate metabolism
peh00670
One carbon pool by folate
peh00680
Methane metabolism
peh01100
Metabolic pathways
peh01110
Biosynthesis of secondary metabolites
peh01120
Microbial metabolism in diverse environments
peh01200
Carbon metabolism
peh01230
Biosynthesis of amino acids
peh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Spb1_29620 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Spb1_29620 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Spb1_29620 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Spb1_29620 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Spb1_29620 (glyA)
Enzymes [BR:
peh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Spb1_29620 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QDV31025
UniProt:
A0A518GQZ7
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Position
complement(3723615..3724871)
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AA seq
418 aa
AA seq
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MADRMPVLTAADPEIAGAIRQEEVRQHDGLELIASENYTSQSVLEAVGSVLTNKYAEGYP
GRRYYGGCEHVDTIESIARTRACTLFGAQYANVQPHAGSQANMAVFMGFLKPGDTFLAMD
LAHGGHLTHGMGLNFSGILYNAVHYGVRESDHRIDFDQVARLAKEHKPKLIIAGASAYPR
EIDHGKFAEIAKSVGALFMVDMAHYSGLVAAGLHNSPVPHADFVTSTSHKTLRGPRSGFI
LCKEEHGKTIDKTVFPGLQGGPLEHVVAGKAVCFREAAQPAFKQYIEQVIKNARALAETL
VAGGVRLASGGTDNHLMLCDVTSVGLTGKIAEHALDVAGVTANKNMIPYDTRKPLDPSGI
RLGTPALTTRGMKEAEMQQVGQWILQIFKHPEDATTLGKIRQEICEFCKNYPVPGIAL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccgtatgcctgtgctgaccgctgcagatcctgagattgctggtgcaattcga
caagaagaagtccggcagcatgacggtctggaactgattgcctcagagaattacaccagt
cagtctgtacttgaagctgtaggctcagtcctcacgaataagtatgccgaagggtatccg
ggtcgacgttattatggtggttgcgagcatgtggatacgatcgagtccattgctcgaaca
cgggcctgcacgctgttcggtgctcaatatgcgaacgtgcagcctcatgccggttctcag
gccaatatggctgtctttatgggctttttgaagccgggagacacttttctggcgatggat
ctggcccatggtggccatctcacgcatggcatgggattgaatttttcgggaattctttac
aacgccgttcattatggtgtacgagagtcggatcaccggattgattttgatcaggtggct
cgtctggcaaaggagcacaagccgaagctgattattgcgggagccagtgcatatccacgc
gaaatcgaccacggaaagttcgccgaaatcgcgaaatccgtgggtgcattgttcatggtc
gatatggcccattattccggattggtggcagcgggcctgcacaacagcccggtgccccat
gcggactttgtgacttcgacctctcacaaaactttgcgcgggccccgatccgggtttatc
ctctgcaaagaagagcatggcaaaacgatcgacaaaacagtctttccaggattgcaggga
gggcctctggagcatgtggtcgctggtaaagcggtctgcttccgtgaagcggctcaacca
gctttcaagcaatacattgaacaggtcatcaaaaacgcccgggcgttggctgaaacatta
gtggccgggggcgtgcgtctggcttctggggggacggataatcacctgatgctgtgcgac
gtcacatctgtcggtctgactgggaaaatcgccgaacatgcgctggatgtcgccggagta
accgccaataaaaacatgattccttacgacacacgaaagccgctggaccccagcggaatt
cgactcggtacaccggcgctcacgactcgaggaatgaaagaagcggaaatgcagcaggtc
ggtcagtggatcctgcagattttcaagcatccggaagatgcaaccaccctgggcaagatt
cgccaggagatctgcgagttctgcaagaattatccagttcccggcattgcgctgtaa
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