Planctopirus ephydatiae: Spb1_30450
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Entry
Spb1_30450 CDS
T06220
Symbol
gyrA_2
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
peh
Planctopirus ephydatiae
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peh03032
]
Spb1_30450 (gyrA_2)
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_30450 (gyrA_2)
Enzymes [BR:
peh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Spb1_30450 (gyrA_2)
DNA replication proteins [BR:
peh03032
]
Prokaryotic type
DNA Topoisomerases
Spb1_30450 (gyrA_2)
DNA repair and recombination proteins [BR:
peh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Spb1_30450 (gyrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Longin
FliT
Motif
Other DBs
NCBI-ProteinID:
QDV31107
UniProt:
A0A518GR85
LinkDB
All DBs
Position
3829050..3831881
Genome browser
AA seq
943 aa
AA seq
DB search
MSNGDVPSASFTPQPDRILPVAIEGEMRTSYVTYAMSVIISRALPDARDGLKPSQRRILV
AMNDLNLGPNSGRVKCAKICGDTSGNYHPHGDGSIYPTLVRLAQNWNMRETLIDKQGNFG
SLAGLPPAAMRYTEARLSAVASEMLDDLKRDTVDYVLTYDQRNREPVVLPSRFPNLLVNG
SSGIAVGMATSIPPHNLAEVSQAVIRLLEDPETSIDELMEVLPGPDFPTGGIICGRYGIR
QGYLTGRSTLTLRAKTRFLTEKNTDIIEVTEIPYLETRDRIREKLEQLVRDDKIKGISRI
VDLTDRTTPAWQVCLHIVLKRDADKEVILNQLFQYSPLQSTFSVILLALSGNRPKTMNIK
ELIGEFIRHRITVIRRKTEFQLAEARKRKHTIEGLLIAQLNIDEVIQTIRSSGSRAEAKE
RLQAILVPSAMVARALGDAGFMEFQSEQGVRETYSLSANQTEAIVSMQLGSLANLEQEKL
RGEHQKLIEDIFGYLHLLSDEAHIRAVIREEMQKLGDKYGNARRTEISEDELSDVDKEDL
IPEEMMVVTLSQRGYIKRLPIHTYQAQNRGGRGIMGAKADDEDAIQDLFISSTHDWLLFF
TDKGRVFWQKVYDLPLQSRTSKGRALVNLLSLQEGEQVATCVNTRTFEENRYLVMATRAG
IVKKTSLDAYKRPTKGGIIAINLKDGDALIEARILSAQEDILLSTANGMAIRFSQADARA
MGRNTSGVRGIKLRKDDEVIGMVVADPAMTLLTMCEKGYGKRTPFGFIESVPVVEDVIPG
EDGVVADEEIAEALPEETDAEEATGEEGEESSSSSRSYRRQRRGGMGVRDIRVIPRNGKV
VKILAVQEGDHVLIVTAGGKIQRVRAAEISEIGRNTQGVRVIKLTEGDRVASMARIPADL
CQETIEEKLDIEPKAQVEDISADQANPSETSTPGDEQTTDSSE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaacggggacgtgccgtcggccagttttacgccgcaaccggatcgaattctccca
gtggctatcgagggagaaatgcgaaccagctatgtcacttacgcgatgagcgtgatcatt
agccgggcacttcctgatgcgcgtgatggacttaagccctctcagcgccgcattcttgtg
gccatgaacgatttgaatctggggccaaactccgggcgagtcaaatgcgcaaaaatctgt
ggtgatacgagcggcaactatcacccccacggcgatggctccatctacccgacactggtt
cgtctggcacagaactggaacatgcgggaaacgctgatcgataagcaggggaactttggt
tcgctggctggtctgccacctgccgccatgcgatataccgaagccaggctctcggctgtg
gcctccgagatgctggacgacctgaagcgagacaccgtggactatgtgctgacatacgat
cagcgcaaccgcgagccagtggtgcttccttcgagatttccgaacctgctggtgaatggt
tccagcggtattgcagtgggtatggccacgagcattccaccacataatctggctgaggtt
tctcaggccgtcattcgcctgctcgaagaccctgagacttccattgatgaactgatggaa
gttctccctggcccggatttccccacaggagggatcatctgtggcaggtacggcattcgt
cagggatatctgacaggccgcagcacgttgacactccgggcaaaaacccgcttcctcaca
gagaaaaacaccgacattattgaagtgaccgagatcccttatctcgaaacccgcgaccgt
attcgagagaaactcgaacaactcgtgcgcgacgacaaaatcaaagggatttcccgcatt
gtcgatctgacagaccgcaccacaccggcgtggcaggtttgcctgcatattgtgctcaag
cgggatgctgacaaagaagtgattctcaatcagctcttccagtattcaccgctgcaatcg
actttcagcgtgattctcctagccttgtcgggaaatcgtcccaagacgatgaacatcaag
gaactcattggagaattcatccggcatcgaatcaccgtcattcgccgtaagaccgaattt
caactggcagaagcccgcaagcgtaagcacacgatcgaaggcttactcattgcccagttg
aacatcgatgaagtcatccagacgattcgatcttctggttcgcgggccgaagcgaaagag
cgattgcaagcgatacttgttccatccgccatggtggcccgtgctctgggtgatgccggt
tttatggaattccagtctgaacagggagtgcgtgaaacctattcactctccgccaaccag
acggaagccattgtgtcgatgcagcttggctcactcgccaatctggagcaggagaaactg
cgtggcgaacaccaaaagctcatcgaagacatttttggctatctccatctgctgagtgat
gaagctcatattcgagctgtcattcgtgaggaaatgcaaaaacttggcgacaagtacggc
aacgcccgccggacagagatctctgaagatgaactcagcgatgtcgataaggaagatctc
atcccggaagagatgatggtcgtcacgttgtcgcagcgcggctacatcaagcgtctgccc
attcatacctaccaggcgcagaatcgtggcggacgcggaatcatgggcgcgaaagccgat
gatgaagatgccatccaggatctgttcatttccagcactcacgactggctgctgttcttt
acggataaaggacgcgtattctggcagaaagtctatgatctgcccctgcagagccgcacc
agtaaaggccgcgctctggtcaacctgctttcgcttcaggaaggtgagcaggtcgcgaca
tgtgtcaatacgcgcacgtttgaagaaaatcgttatctcgtcatggctacccgggcaggg
attgtcaaaaagacctcgctggatgcttacaaacgtcccaccaagggggggatcattgcc
atcaacctgaaagatggggatgcactgatcgaggcccgcattctatcggctcaggaagat
attctgctgtccacagccaacgggatggccatccggttttctcaggcggatgcccgggcc
atgggtcgcaacacgagtggcgttcgcggtatcaagcttcgaaaagacgacgaagtgatc
gggatggttgtcgctgacccggccatgactctcctgacgatgtgtgaaaaaggctacgga
aagagaactccgttcggcttcatcgaatcggttcccgtcgtcgaagacgtgatccccgga
gaagatggcgttgtggccgacgaagaaatcgcggaagccttgcctgaagagacagatgcc
gaagaggcaactggcgaagagggcgaagaatcaagctcttcatctcggtcgtatcgacgt
caacgacgtggcggtatgggtgtccgggatattcgagtcatcccacgcaatgggaaagtc
gtcaagattctcgctgtccaggaaggtgatcacgtgctgatcgtgacagcgggtggcaaa
attcaacgtgtgcgggcagcggaaatcagcgaaatcggtcgtaacactcagggagtgcga
gtcattaagctgactgaaggtgatcgagtcgcatcgatggcgcgcattccggccgatctc
tgccaggaaacaatcgaagagaagctggatatcgaaccgaaagcacaggtcgaagacata
tcggcagatcaggccaacccatccgaaacatcgactcccggagatgagcaaacaaccgat
tccagcgaataa
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