Planctopirus ephydatiae: Spb1_32280
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Entry
Spb1_32280 CDS
T06220
Name
(GenBank) Farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00900
Terpenoid backbone biosynthesis
peh01100
Metabolic pathways
peh01110
Biosynthesis of secondary metabolites
Module
peh_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Spb1_32280
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
peh01006
]
Spb1_32280
Enzymes [BR:
peh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Spb1_32280
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Spb1_32280
2.5.1.29 geranylgeranyl diphosphate synthase
Spb1_32280
Prenyltransferases [BR:
peh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Spb1_32280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
QDV31284
UniProt:
A0A518GRS5
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All DBs
Position
complement(4071514..4072470)
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AA seq
318 aa
AA seq
DB search
MSAAHLPASQSPVATNLSGGAVEFTQHLRELQKQIEVAMDAALSATPDVTRFVPPSLFES
LRYSALGGGKRLRPVLVLLASEACGADPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLR
RGRPTNHIVYGEATAILAGDGLLTRAFEVLATEISNKELALACVADLASAAGWCGMVGGQ
AADLAAETTPVTTLVELEQIHHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLA
FQIADDLLDVEGSSEKLGKQTQKDAQAGKATYPGFLGVEASRERATDLVKQACRELELFG
PRGQWLSDLALYIIERDH
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgctcatcttcctgcttctcaatcacccgtggccacgaatttgtccggtggc
gcggttgagtttactcagcatttgagagaattgcagaagcagatcgaagtggccatggac
gctgccctgagtgcgacgcctgacgttacacgatttgttccaccctcgctgtttgaatcg
ttgagatacagtgccctggggggaggaaagcggttaaggccggttctggtcctgctggcg
agcgaagcgtgcggagccgatccgctgcaggcgatgccggcggctgtcgccctcgagatg
attcattgttattctctgattcatgacgatttgccggccatggacgacgatgatctgcgt
cgcggacggcccacaaatcatatcgtttatggtgaagcgacagcgattctggcgggtgat
ggcctgctgacgcgcgcttttgaagttctggcgaccgagatttcgaacaaagaactggca
ttggcctgtgtggcggatctggcatcggctgcaggttggtgcggtatggtgggtggacag
gcggctgatctggcagccgagacaacacctgtgaccactctggttgagctggagcagatt
catcatcgcaagactgggcgattactggcatgtgccttgacaatgggtggtcgattgggc
ggagcttcggtgcagcaactggaatcgctggcgcgttatgggtttgccattggcttggca
tttcagattgctgatgacctgctggatgtcgaaggttcatcggaaaagctggggaagcag
acacaaaaggatgcccaggccgggaaggcgacttaccctggttttctgggagtcgaagcc
agccgtgagagagcgacagatctggtcaagcaggcttgtcgagaactggaattgttcggg
ccacgaggccagtggttgagtgatctggcactgtacattattgaacgtgatcactaa
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