Planctopirus ephydatiae: Spb1_35340
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Entry
Spb1_35340 CDS
T06220
Symbol
msbA_2
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spb1_35340 (msbA_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peh02000
]
Spb1_35340 (msbA_2)
Enzymes [BR:
peh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Spb1_35340 (msbA_2)
Transporters [BR:
peh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spb1_35340 (msbA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_16
AAA_29
AAA_15
ABC_ATPase
AAA_22
Zeta_toxin
DUF3584
DUF87
AAA_23
FtsK_SpoIIIE
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QDV31589
UniProt:
A0A518GSN0
LinkDB
All DBs
Position
4461201..4463288
Genome browser
AA seq
695 aa
AA seq
DB search
MREWSRLARYVRPYWKLLAFAISFGGVVALLWGGALLLTYPVIKVFLEGEHLGSYIQNEI
ETSSRKLDESRNELHQLLIRHGMALEPEVGPAAISLQASHPSTVKTLPLSATREQARLQK
EIDTWARRLYLMTWLNQRVVPWLPDDPFRLLLGLMGILVAATFLKGAATVIQDLYVGKVA
ELTVMDLRKDLYRHLLKSDPLEVAATGTPRYMATFMNDAQQLTQGLMLAGGEVIREPLKA
MTCLSAALMINFRLTFVLLLFVPIAGTMFYLLSRRLKRAMHRTLDAMSRIYQQLEETFSL
SRIVIAFGTQRDHRARFRRENRAYFRKALQIVRIDALSSPVAENLGMMAVMAVLIPAGYL
VLEGQTFIGPIQFTETPMNFTDLSVLYTLMAGTLDPIRKFSRYVTRIRQTGTAAERIFKA
LDQQPSIIPPANPVPLPRHAEAIRFEGITFTYPQAEGENRRPVLINLDLTIHAGEAVAIV
GTNGSGKSTLVNLLPRFADPQKGRILIDGIDLRDVKPRDLRDQIAIMSQETMLFDDSIAG
NIRSGASTEQESPSREAIESAAARSSVLEFANKLPNGLETGLGSGGRELSGGQRQRIALA
RAMLRDPSILILDEPTSAIDAHSEQAIQKALAEFTKGRTTLLITHAMSPSLLSFISRIVV
LDQGRLIADGQHHELLATCPIYQRLFHSEPLQAAA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggaatggagtcgcctcgcgaggtacgtcaggccctattggaagctgctggcattt
gccatcagcttcggaggcgttgttgcgcttctctggggtggcgcgctcctgctgacatat
cccgtcatcaaagttttcctcgaaggcgaacatctcggctcttacatccagaacgagatt
gaaacctcttccagaaagctcgacgaatcacgaaacgagctccatcaacttctcattcgc
catggaatggctctcgaaccagaggtcggccctgctgcgatctccttacaagcctctcat
ccatcgacagtaaaaactttgcctctcagcgccacacgcgagcaggccagactccagaaa
gagatcgatacctgggcgcgcaggctctacctcatgacgtggcttaaccagcgcgttgtc
ccctggctgccggatgatcccttccgactgctcctgggactcatgggaattcttgtggca
gcaacattcctcaaaggagctgcaacggtcatacaggatctctatgtcggtaaagtggcc
gaactgactgtcatggatctgagaaaagacctctatcgccatctgttgaaatcagatcct
ctcgaagtcgctgccactgggactccccggtacatggcaacgttcatgaatgacgctcag
caattgacacaagggctgatgctcgctggcggcgaagtcattcgcgaacctcttaaggcc
atgacctgcctgagtgccgcactgatgatcaactttcgcctcacgttcgtcctgctgctg
ttcgtaccaattgccggcacgatgttctacctgctcagccgcaggctcaaacgagcgatg
catcgcacactcgatgccatgtcccgcatttatcagcaactggaagaaaccttttcgctc
tctcgaatcgtgattgcctttggaacacagcgcgatcaccgggcccgctttcgacgcgag
aatcgcgcgtatttccgcaaagcgctacaaatcgtcaggatcgatgcactcagcagccct
gtcgctgaaaacctcggaatgatggcggtgatggccgttctcattccggcaggttatctc
gtgcttgaaggccagacattcattggcccgatccagttcactgaaacccccatgaacttc
accgatctttccgtgctctacacactcatggcgggaactcttgaccctatccgcaagttc
tcgcgatacgtcacgcgtatccgccagacgggaacggccgccgaacggattttcaaagcc
ctcgatcagcaaccctcgatcataccacctgcgaatccagtccctcttccgaggcatgcc
gaagcaattcgatttgagggcattacatttacttatccgcaggccgaaggtgagaaccgc
cgaccggtgctcatcaatctcgatctgacgatccatgccggagaggctgtcgcgattgtc
ggcaccaatggctctggaaaatcgacactggtcaatctgttgcctcgcttcgctgaccct
caaaaaggccgtatcctgattgatggcatcgatctccgcgatgtcaaacctcgcgatttg
agagatcagatcgccattatgtctcaggaaaccatgctcttcgatgattcgattgccggg
aatattcgcagcggtgcctccacagaacaggagtctccctcgcgtgaagcgattgaatca
gcggccgcccgaagttccgttctcgaattcgccaacaaacttcccaatggcctggaaaca
ggcctcggttctggcggccgggagctctctggcggtcagcgtcagcggatcgcattggcc
agagccatgcttcgcgacccttccatcctgattctcgacgagccgacatctgcgattgat
gctcacagcgaacaggccattcagaaagctctggctgaattcacgaaaggccgcaccacc
ttactgattacgcatgcgatgtcgccttcgttactcagcttcatcagccggattgtggtg
ctcgatcaaggccgcttgattgccgatggccagcatcacgaattgctcgctacctgcccc
atttaccagcgactcttccacagcgagccactgcaagccgctgcttaa
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