Planctopirus ephydatiae: Spb1_40220
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Entry
Spb1_40220 CDS
T06220
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spb1_40220 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
peh01007
]
Spb1_40220 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peh03016
]
Spb1_40220 (aspS)
03029 Mitochondrial biogenesis [BR:
peh03029
]
Spb1_40220 (aspS)
Enzymes [BR:
peh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Spb1_40220 (aspS)
Amino acid related enzymes [BR:
peh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Spb1_40220 (aspS)
Transfer RNA biogenesis [BR:
peh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Spb1_40220 (aspS)
Prokaryotic type
Other AARSs
Spb1_40220 (aspS)
Mitochondrial biogenesis [BR:
peh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Spb1_40220 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QDV32074
UniProt:
A0A518GU08
LinkDB
All DBs
Position
complement(5059642..5061411)
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AA seq
589 aa
AA seq
DB search
MYRTKTCGELRIEHVGQVATLCGWVDSYRDHKGVVFIDLRDRYGITQVVFQADTPTDMQT
IARGLRSEDVIQVTGEVLARGAGLENPKLVTGQVEVRGRELTLLNKSKTPPFEPRTQDLP
NEELRMQYRYLDLRRPVVQQAIILRHKLAKATRDYFDRHNFLEIETPILGRSTPEGARDY
LVPSRVHEGSFYALPQSPQLYKQILMVAGYDRYFQIARCFRDEDLRADRQPEFTQIDVEM
AFVKQDDILSTIDGLMAHLLMELRGEELPLPLPRLTHREVMEKYGSDKPDLRFGMELICL
KEIAENCGFSVFKNTIANGNRVRGIVAPGAAEKYSRKQIDELTEFVKQYGAQGLAFFRVK
EEGLDSPIAKFFSAEDQQKLIAKLGAKAGDLIFCVADTAKVSSAALGALRNRLAKELALY
DPKEMKIAWVVDFPMFQWDEDEQRWVAEHHPFCQPHEEDIDILETDPGKVRAQSYDLVCN
GYEAASGSVRIHDPAVQQRIFSMMGIQPEEAELRFGFLLEALRYGAPPHAGVALGLDRWS
MMFSGTDNIRDVIAFPKNQKASDLLTGAPAPVDAKQLRDLRIKVDVPVK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgtaccggaccaagacctgcggcgaactgcgtatcgagcatgttggacaagttgccact
ctttgtggctgggtagacagctaccgcgatcacaagggggttgtcttcatcgacctgcgt
gaccggtacggcatcacccaggtcgtcttccaggctgacactccgaccgacatgcagacc
atcgcccgcggcctccgcagtgaagatgtcatccaggtgacgggtgaagtcctcgcgcgt
ggtgccggtctcgaaaaccccaagctcgtcaccgggcaggtggaagttcgcggccgcgag
ttgacgctgctcaacaagagcaagacgccccccttcgagccccgcacgcaggatcttccc
aacgaagaactccgcatgcagtaccgctatctcgacctgcggcgacccgtggtacagcag
gcgattattctgcggcataagctcgccaaagccactcgcgactacttcgaccgtcacaac
ttcctcgaaatcgaaacccccattctgggccggtcgacgcctgaaggggcgcgggattac
ctcgttcccagccgggttcacgaggggagcttttatgcgctgccgcaatcgccccagctc
tacaagcagattctgatggtcgccggctatgaccgttacttccagattgcccgctgcttc
cgcgatgaagacctgcgggctgatcgccagcccgagttcacccagatcgacgtcgagatg
gccttcgtcaagcaggacgacatcctttcgaccatcgacggcctcatggcccacctgctc
atggagctgcgcggcgaggaactgccgctgccgctcccacggctcacgcaccgtgaagtc
atggaaaagtacggctccgacaagcccgacctgcggtttggtatggaactgatctgcctc
aaggagattgctgaaaactgcggattcagcgtattcaagaataccattgccaatggcaac
cgcgtgcggggaattgttgctcccggtgctgccgagaaatacagccgcaagcagatcgat
gaactgacggaattcgtgaagcagtacggtgcgcagggcctcgccttcttccgcgtgaag
gaggaaggtctcgattcgccgatcgccaagttcttctcggcggaggatcagcagaagctg
atcgccaagctgggtgccaaggctggcgacctgatcttctgcgtggccgacactgccaag
gtttcctcggcggctctgggtgcactgcgcaaccgtctggcgaaggaactggccctttac
gatccgaaggaaatgaagatcgcctgggtcgtcgatttccccatgttccagtgggatgaa
gacgagcagcggtgggtggctgagcaccatcccttctgtcagcctcatgaagaagatatc
gacattctggagaccgatccgggcaaggtgcgggctcaatcgtacgacctggtctgcaac
ggttatgaggcagccagcggcagcgtccgtattcatgatcccgccgtccagcagcggatc
ttcagcatgatggggatccagccggaagaggccgaactccgcttcggcttcctgctggaa
gccctgcgttatggcgctccgcctcatgccggtgtggcgctgggtctggaccgctggtcg
atgatgttttccggcaccgacaacatccgcgacgtcatcgccttcccgaagaatcagaag
gccagcgacctcctcaccggcgccccggctccggtcgacgcgaaacaactccgcgaccta
cggattaaggtcgacgtgccggtgaagtag
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