Phycicoccus endophyticus: H9L10_00280
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Entry
H9L10_00280 CDS
T06776
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pei
Phycicoccus endophyticus
Pathway
pei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9L10_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pei03400
]
H9L10_00280
Enzymes [BR:
pei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H9L10_00280
DNA repair and recombination proteins [BR:
pei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L10_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
AAA_22
AAA_11
AAA_16
Helicase_RecD
TraI_hel_assoc_N
UvrD_C_2
AAA_5
SRP54
PhoH
DEAD
T2SSE
SLFN-g3_helicase
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QNN50820
UniProt:
A0A7G9R5E5
LinkDB
All DBs
Position
complement(48926..51592)
Genome browser
AA seq
888 aa
AA seq
DB search
MHGGVKFYRGSAVAARSYVEADRSRADDYYLAEGTGLATRFVATTGPDSPATVLEAGALD
GPAYERWVAGYDAETGAAKGQLRTDERGLRFVEVVVNGPKTWSLAASLHPEIAAAYDTAQ
EKAAREIIGWLAEHATTRVGPRGRQVQVPVDRLEAAVVRHHTSRAGDPHRHLHLQVNARV
LAGGKWRGLHSVGVVDFIQAVNGIGHAAVACDLDFRRALAARGYHLDPASGEVAELAPYA
GRFSARAAQIGRNIDRYEAAWRTEHPGAEPDQRLRRTWDRRAWAQARPDKVTPTSGADLV
ARWREELHDLGFTPPRPDPDLGAGLVGTAVGRVNRDAVADLVLTRLGARRSAWNAADIRG
ETEQIVAGLDVITAPTVRGELVEDLTTRAVYRCVPLLDRGDVPEHVRALTSRRVLDVESD
ITTRLAARANHPGTPDPVGARSGGRALDPAQRGAVGAMAGTARLVVVEGAAGAGKTTTLA
AARDLLDVQGHRLVVVTPTMKAAQVVQAETGADAFSAAWLAHHHGHRWDSDGHRWHEPGP
VHPLARLLPGDLLVVDEAGMLDQDTAQALLQVADTAGARLALVGDPHQLPAVGRGGVLDH
AIRWATPDAHVLLDGIHRFDDPDYAALTLLMRTGQDPAHVFDALHDRGQVVLHPTAVERT
AALARVDGLVIADTRDQIAALNAAIRDHRRTERTSPTAPAVTTRAGETLAAGDLVATRRN
HPDLRVANRDRWTITAVEKDGSVVVGGRRGTRHLPADYVQDHLELAYATTVHGAQGDTVP
AAHFLLDETTGAAATYVAMTRGRHTNTAHLVADTLEGARAQWVTTFSRDRADLGPAHAID
QALEDIDRYGPQAPASLLYSPVVPAPRRAPERTPWRPTSPDRSPHIGR
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtgcatggcggggtgaagttctaccgcggatcggctgtcgcggcccgctcctacgtggag
gcggaccggtcccgggcggatgactactacctggctgagggcaccggcttggcgacccgg
ttcgtcgccaccacgggtccggacagcccggcgaccgtgctggaggcgggggcgttggac
ggcccggcgtacgaacggtgggtcgccggctacgacgccgagaccggggccgccaagggg
cagctgcgcaccgacgagcgggggctgcggttcgtcgaggtcgtcgtcaacggacccaag
acctggtccctggccgcgtccctgcaccccgagatcgccgccgcgtacgacacggcgcag
gagaaggcggcgcgggagatcatcgggtggctcgccgagcacgccaccacgagggtcggg
ccgcggggccggcaggtccaggtgccggtcgaccggctcgaggcggccgtggtgcggcac
cacacctcgcgggcgggtgacccgcaccggcacctgcacctccaggtgaacgcccgcgtc
ctggccggcgggaagtggcgggggctgcactcggtcggggtcgtggatttcatccaggcg
gtcaacgggatcggtcacgccgcggtcgcctgcgacctcgacttccgccgggcactggcg
gcccgcgggtaccacctcgaccccgcgtcgggtgaggtcgccgagctggccccgtacgcc
gggcggttcagtgcccgcgcggcccagatcggccggaacatcgaccggtacgaggcggcg
tggcggaccgagcatcccggcgccgagccggaccagcggctgcgtcgcacgtgggaccgg
cgggcctgggcgcaggcccgcccggacaaggtcaccccgaccagcggggcggacctggtc
gcgcggtggcgcgaggagctgcacgacctcggcttcaccccaccccggccggacccggac
ctcggcgccgggttggtcgggacggctgttgggcgggtgaaccgggacgccgtggccgac
ctggtcctgacccggctcggcgcgcgccggtcggcctggaacgccgccgacatccgcggc
gagaccgaacagatcgtcgccggcctcgacgtcatcaccgcgccgacggttcggggagag
ctggtcgaggacctcaccacacgtgccgtgtatcggtgcgtgccgctgctggaccgcggc
gatgtccccgaacacgtgcgggcgctgacctcgcggcgggtcctcgacgtcgagagcgac
atcaccacccgcctcgccgcccgcgccaaccatcccggcacacccgatcccgtcggtgcc
cggagcggcgggcgggccctggaccccgcccagcggggggcggtcggcgcgatggccggg
actgcgcggctggtcgtcgtcgaaggcgccgccggagccgggaagaccacgactctcgcc
gcggcccgtgacctcctcgacgtgcaagggcaccggctcgtcgtggtcaccccgacgatg
aaggccgcccaggtggtgcaggccgagaccggcgcggacgcgttctccgccgcctggctg
gcccaccaccatggtcaccgctgggacagcgacggacaccgctggcacgaaccgggacct
gtccacccgctggcgcggctgctcccgggtgacctgctcgtcgtcgacgaggccggtatg
ctcgaccaggacaccgcccaagcgctgctgcaggtcgccgacaccgccggcgcccgcctc
gccctcgtcggcgacccccaccagctgcccgccgtcggccgcggcggcgtcctggaccac
gccatcaggtgggccacccccgacgcgcacgtcctcctcgacggcatccaccggtttgac
gaccccgactacgccgccctcaccctcctgatgcgcaccggccaggaccccgcccacgtt
ttcgacgccctccacgaccgcggacaggtcgtcctgcaccccaccgccgtcgaacgcacc
gccgccctcgcccgggttgacgggctcgtcatcgccgacacccgcgaccagatcgccgcc
ctcaacgccgccatccgcgaccaccgccgtaccgaacggacctcgccgacggcgccggcc
gtgaccacccgtgccggggagaccctcgcggccggggacctcgtcgccacccgccgcaac
caccccgacctgcgcgtcgccaaccgcgaccgctggaccatcaccgcagtggagaaggac
ggctccgtcgtcgtcggcggtcgacgcggcacccggcacctacccgccgactacgtccag
gaccacctcgagctcgcctacgccaccaccgtccacggcgcccaaggcgacaccgtcccc
gccgcgcacttcctcctcgacgagaccaccggcgccgccgccacctacgtcgccatgacc
cgcggccgacacaccaacaccgcccacctcgtcgccgacaccctcgagggcgcccgcgcc
cagtgggtcaccaccttcagccgcgaccgcgccgacctcggacccgcccacgccatcgac
caagcgctcgaggacatcgaccgctacggaccccaagcgcctgccagcctcttgtactcc
ccggtcgtcccggcgccacgccgcgcacccgagcgcaccccctggcggccgacgtcaccc
gaccgctccccccacatcggacggtaa
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