Phycicoccus endophyticus: H9L10_02725
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Entry
H9L10_02725 CDS
T06776
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pei
Phycicoccus endophyticus
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pei03032
]
H9L10_02725
03400 DNA repair and recombination proteins [BR:
pei03400
]
H9L10_02725
Enzymes [BR:
pei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9L10_02725
DNA replication proteins [BR:
pei03032
]
Prokaryotic type
DNA Topoisomerases
H9L10_02725
DNA repair and recombination proteins [BR:
pei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9L10_02725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
QNN50011
UniProt:
A0A7G9R336
LinkDB
All DBs
Position
579188..580192
Genome browser
AA seq
334 aa
AA seq
DB search
MARLRRVSPRSVGWTRRRSGRGFAYRDATGAPLAPEQVARVRSLAIPPAWRDVWICPYPN
GHIQAVGTDAAGRRQYLYHPAWRVARDELKFDRVAAAGRRLAKARERIVEDLSGEGMPLA
RAAATATRLLDLGYFRIGSDAYADANGSFGLTTLERRHVRRRGSDLVFRFVGKSGVEHAV
TISDPQVIEALEHMRRRRGGSARLLAYRESSRWADLQAAAVNEYISQMVAEDLTAKDFRT
WHATVLAAVALAQSPEPGETLASRRRAVRAAVEEVAAYLGNTPTVARGSYIDPRVLDQYE
DGVTIAATLARRYPDPARRQAAVEKAVARLVRGA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggctgcggcgggtgtcaccccggtcggtgggctggacccggcggcgcagtggg
cgggggttcgcctaccgcgacgccaccggcgcgccgctggcccccgagcaggtcgcccgg
gtgcgctcgctcgccatcccgccggcgtggcgggacgtgtggatctgcccgtaccccaac
ggccacatccaggccgtcggcaccgacgccgccggccggcgccagtacctctaccacccg
gcctggcgggtcgcccgcgacgagctgaagttcgaccgggtcgccgccgccggccggcgc
ctcgccaaggcccgcgagcggatcgtcgaggacctctccggcgaggggatgccgctcgcc
cgggccgccgccaccgcgacccggctgctcgacctgggctacttccggatcgggtcggac
gcctacgccgacgccaacggctccttcgggctgaccaccctcgagcgccgccacgtgcgc
cggcgcgggtcggacctggtcttccgcttcgtcggcaagtccggggtcgagcacgcggtc
acgatcagcgacccccaggtcatcgaggccctggagcacatgcgccggcgccgtggcggc
tcggcccggctgctcgcctaccgggagagctcgcgctgggcggacctgcaggccgcggcg
gtcaacgagtacatctcccagatggtcgccgaggacctgaccgccaaggacttccgcacc
tggcacgcgaccgtgctcgccgcggtggcgctcgcgcagtcgccggagccgggcgagacg
ctcgcctcccgccggcgcgcggtccgggccgccgtggaggaggtcgccgcctacctcggc
aacaccccgaccgtcgcccggggctcctacatcgacccgcgcgtcctcgaccagtacgag
gacggcgtgaccatcgcggcgaccctggcgcgtcgctaccccgacccggcccgccggcag
gcggcggtggagaaggcggtcgcgcggctcgtccgcggtgcctga
DBGET
integrated database retrieval system
