Phycicoccus endophyticus: H9L10_03215
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Entry
H9L10_03215 CDS
T06776
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pei
Phycicoccus endophyticus
Pathway
pei03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
H9L10_03215 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pei03019
]
H9L10_03215 (orn)
03009 Ribosome biogenesis [BR:
pei03009
]
H9L10_03215 (orn)
Messenger RNA biogenesis [BR:
pei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9L10_03215 (orn)
Ribosome biogenesis [BR:
pei03009
]
Eukaryotic type
Pre-60S particles
RNases
H9L10_03215 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QNN50091
UniProt:
A0A7G9R3B6
LinkDB
All DBs
Position
complement(683077..683748)
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AA seq
223 aa
AA seq
DB search
MSSTPDRAHTDRIVWIDCEMTGLSLEADALVEVAALVTDFDLTVLGDGVDVVVRPPEEAL
AQMGDFVREMHTTSGLLEELAEGTSLEQAQSMVLDYVRAWVPEPGKAPLGGNTVATDRAF
LARDMPDLEAYLHYRIIDVSSIKELSRRWFPRAYFAAPTKSGGHRALADIRESIAELRYY
REAVFVPPPGRSSDELRTLAARHVVDHAVAVAGTRGPSPEPAG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccacgcccgaccgcgcgcacaccgaccgcatcgtgtggatcgactgcgagatg
acggggctctcgctcgaggccgacgcgctcgtcgaggtcgccgccctcgtcaccgacttc
gacctgaccgtcctcggcgacggggtcgacgtcgtcgtccgcccgccggaggaggccctg
gcccagatgggcgacttcgtccgcgagatgcacacgacctccggcctgctcgaggagctc
gcggagggcacgagcctcgagcaggcccagtcgatggtcctcgactacgtccgggcctgg
gtccccgagccgggcaaggccccgctcgggggcaacacggtggcgaccgaccgggccttc
ctcgcgcgtgacatgcccgacctcgaggcgtacctgcactaccggatcatcgacgtctcc
tcgatcaaggagctctcccggcgttggttcccgcgggcctacttcgccgcgccgaccaag
tccggcggccaccgcgccctcgccgacatccgcgagtccatcgccgagctgcgctactac
cgcgaggccgtcttcgtgccaccgccgggccgctcgagcgacgagctgcgcaccctggca
gcccggcacgtcgtcgaccacgccgtggcggtggccgggacccgaggcccgtcgcccgag
ccggccgggtga
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