Phycicoccus endophyticus: H9L10_04000
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Entry
H9L10_04000 CDS
T06776
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pei
Phycicoccus endophyticus
Pathway
pei00550
Peptidoglycan biosynthesis
pei01100
Metabolic pathways
pei01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H9L10_04000 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L10_04000 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pei01011
]
H9L10_04000 (mrdA)
Enzymes [BR:
pei01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H9L10_04000 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pei01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
H9L10_04000 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Uma2
Motif
Other DBs
NCBI-ProteinID:
QNN50217
UniProt:
A0A7G9R3P2
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All DBs
Position
828792..830786
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AA seq
664 aa
AA seq
DB search
MTDVGRHRGRLAAAFVVVVLAFAGLATRLGQVQLAGADGVSAQASSLDTRTVVEPALRGR
ILDRTGRVLAENRASTVVTLERRVIAEDRPSAEAEVRAVARVLGLPAARLLGRTWLCGEE
GAPAAPTCWSGSPQVPVPLATGVDPQRALALVERPDRFPGVAVDSVPVRVYPRPEGVSAA
HVLGYLGQATAQEVADDPDIGAGDLVGRSGLEQEYDDVLRGTPGRTVVAVDARGLVTGVV
SRTEPVPGRDLVTSLDVDAQAAAERALADAIATDRARGGGGRADSGAVVALDATSGAVVA
LASAPTYDPNVWTGGISAADYADLTDEDAGTPLLSRATAVALPPGSTVKPSSVVAAVRAG
NPLSGLYDCPAQYRIGDRVFRNHESYDRGLMSLERAVETSCDTVFYDVAYRAWQDQGGVS
AGVDAADPFARAARGFGLGTRTGVDLPGESAGRVPDRAWRRQTWEASKEELCRRAREGYP
EVADAARRRYLRAVARENCASGWQLRGGDAANLAIGQGDTLATPLQLAVMYAALGNGGTR
PTPRVAAATVDTSTGERTAVPAGPRVSAPLDRRLGRYLRRALRGVVTDGTAARVFADEPA
DWPVAGKTGTAEQVGERDTSWFAAYAPADHPQWVVTAVVHRGGYGDASAAPAVQRVLLAL
RGLG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgtgggccgacaccggggccgcctggccgccgcgttcgtcgtcgtcgtgctc
gccttcgccgggctcgcgacccggctgggccaggtgcagctcgccggtgccgacggcgtc
tcggcgcaggcgtcctcgctcgacacccgcaccgtcgtcgagcccgccctgcgcgggcgg
atcctcgaccgcaccgggcgggtgctcgccgagaaccgggcgagcacggtggtgaccctc
gagcggcgggtcatcgccgaggaccgcccgtccgccgaggccgaggtccgggcggtggcc
agggtgctcgggctgcccgctgcccgcctgctcgggcggacctggctgtgcggggaggag
ggggcgccggcggcaccgacctgctggtccggctcgccccaggtcccggtgccgctcgcg
accggcgtcgacccgcagcgtgcgctcgcgctcgtcgagcggcccgaccggttccccggc
gtggccgtcgactccgtccccgtgcgcgtctacccgcgcccggagggggtgagcgccgcc
cacgtcctcggctacctcgggcaggccaccgcacaggaggtcgccgacgaccccgacatc
ggtgccggcgacctcgtcgggcgctcggggctggagcaggagtacgacgacgtcctgcgc
ggcaccccgggccggacggtcgtcgcggtcgacgcccgggggctcgtcacgggggtcgtc
tcgcggaccgagccggttcccgggcgcgacctggtcacctcgctcgacgtggacgcccag
gccgccgccgagcgcgccctggccgacgccatcgccaccgaccgggcccgcggcgggggc
ggccgggcggactccggtgccgtggtggccctcgacgccacgagcggtgccgtcgtcgcc
ctcgccagcgccccgacgtacgacccgaacgtgtggaccggcgggatctccgcggccgac
tacgccgacctgaccgacgaggacgcggggacccccctgctctcgcgcgccaccgccgtc
gccctgcccccgggcagcacggtcaagccctcctccgtcgtcgccgcggtgcgcgccggc
aacccgctctccgggctgtacgactgcccggcgcagtaccgcatcggcgaccgggtcttc
cgcaaccacgagagctacgaccggggcctgatgagcctggagcgcgccgtggagacctcg
tgcgacaccgtcttctacgacgtcgcctaccgggcctggcaggaccagggcggggtctcg
gcaggcgtggacgccgcggacccgttcgcccgggcggcccgggggttcggcctcgggacc
cggaccggggtcgacctgcccggggagagcgccggtcgggtcccggaccgtgcctggcgg
cggcagacctgggaggcgagcaaggaggagctgtgccggcgtgcccgggaggggtacccc
gaggtggccgacgccgcccgccgccgctacctgcgggcggtcgcccgggagaactgcgcg
tcggggtggcagctgcgcgggggagacgccgcgaacctcgccatcgggcagggcgacacc
ctcgcgacgccgttgcagctggcggtcatgtacgcggcgctcggcaacggcggcacccgg
ccgaccccccgggtggcggcggccacggtcgacacctccaccggggagcgcacggccgtg
ccggccggcccgcgggtctctgcacccctggaccggcgcctcgggcgctacctgcgccgg
gcgctgcggggggtcgtgacggacgggaccgcggcccgggtcttcgccgacgagcccgcg
gactggccggtggcgggcaagaccggcacggcggagcaggtcggggagcgggacacctcg
tggttcgcggcctacgcaccggcggaccacccacagtgggtggtcacggccgtcgtgcac
cgcggcggctacggcgacgcctcggcggccccggccgtccagcgggtgctgctcgccctg
cgcggcctggggtga
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