KEGG   Phycicoccus endophyticus: H9L10_04180
Entry
H9L10_04180       CDS       T06776                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pei  Phycicoccus endophyticus
Brite
KEGG Orthology (KO) [BR:pei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pei03400]
    H9L10_04180
Enzymes [BR:pei01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H9L10_04180
    5.6.2.6  RNA 3'-5' helicase
     H9L10_04180
DNA repair and recombination proteins [BR:pei03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    H9L10_04180
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr WHD_4th_Lhr DEAD Helicase_C ResIII AAA_25 DUF6406 Mg_chelatase AAA_22 PhoH
Other DBs
NCBI-ProteinID: QNN50247
UniProt: A0A7G9R3S2
LinkDB
Position
complement(867127..871818)
AA seq 1563 aa
MDGDVLDRFSPATAAWFRGSFSAPTPAQAGAWEAISGGHHALVVAPTGSGKTLAAFLWAL
DRLASRPVPAERLRRCRVLYVSPMKALAVDVERNLRSPLVGIRHAAARLGLPEPETTVAV
RSGDTPADERRAFARTPSDILITTPESLFLLLTSAAREALTGVETVVLDEVHALAGTKRG
AHLALSLERLDALLPAPAQRIGLSATVRPVEEVGRFLAGGRPVEVVQPPAAKEWDLRVVV
PVPDMSELGQPTGDLAGAAAGPERRASIWPHVEERIVDLVAEHTSTLVFANSRRLAERLT
SRLNEIWQERLEAADGDAAVGAPGADPRPATLAAAPAQVMAQSGRSAGAAPVIARAHHGS
VSKEHRGQIEEELKSGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGH
QVGAVSRGVLFPKFRGDLVQTAVVVERMLTGSIEALRVPQNPLDVLAQQVVAMCALEEWG
VEDLLALARRSAPYATLTRPVLESVLDMLAGRYPSEDFAELRARLTWDRLSDTLVGRRGA
QRLAVTSGGTIPDRGLYGVFLATGEGPGRRVGELDEEMVYESRVGDLFTLGTSTWRIEDI
THDRVLVTPAPGLPGRLPFWKGDSLGRPAELGRAVGEFVREVGALSDDAAHERVMAAGLD
AWAAENLLTYLREQREATGHLPDDRTVVVERFRDELGDWRIAVHSPFGAQVHAPWALALS
ARMRDRFGVDVQAMHGDDGIVLRLPDLEWDDVEGLDRRGVGRELLELVTLDPEQVRGIVT
DEIGGSALFASRFRECAARALLLPRRRPDRRQPLWQQRQRASQLLEVASRFPTFPIVLEA
VRECVQDVFDVPGLTELMRDVAARRVTVVEVESATPSPFAASLLFGYVAQFLYEGDTPLA
ERRAAALALDPGLLAELLGGSEGLALRDLLDAEQVARTEAELQRLTPERAARDGDDVLDL
LRALGPLSVDAVLQRCREGVTGDDVEAWLGGLEAVRQVIPVRVAGEERWAAVEDASRLRD
ALGASLPPGVAQTFLEPVADPLGDLVARYARTHAPFRPAQVAQAYGLGVAVVAPALARLV
ASGRVVEGELLPTGGGGTELCDAEVLRTLRRRSLAALRAEVEPVPPEAFGRFLAEWQGVG
GRLRGRDGVLRVVEQLSGAVLPASAVESLVLPARVADYSPALLDELLASGEVLWAGHGSL
PGDDGWVSLHVADSAQLTLPGPDPDQVPDEDGRALLDALAGGGGHFFRGLADRLGSSDDE
ALATSLWGLVWSGRVTGDTFAPVRALLAGGRTAHRRAASGPRRTRYGGRRGPLGALGSAP
TRPALPLRSGPPRTTGRWSLLSPVDQEPTLRALATAELLLDRYGVVTRGAVAAEDVPGGF
AGVYRVYGRAEESGRVRRGYFVEGLGASQFGTSGAIDRLRAGGHHRGGADAVVLAASDPA
NPYGAALPWPERVLDTAPEDAPEGRRRRHQAGRKAGAVVVLVGGLLALYVERGGRTLLTY
SDDVEVLTVAATALGAAVRQGHLGRVTVERADGDRLLGSDHPVAAALEAAGFHLTPRGLR
MRR
NT seq 4692 nt   +upstreamnt  +downstreamnt
atggatggtgacgtcctcgaccggttctcccccgccaccgccgcctggttccggggcagc
ttcagcgcacccaccccggcccaggccggcgcctgggaggcgatctccggcggccaccac
gccctcgtcgtggctcccaccgggtcgggcaagacgctcgcggccttcctgtgggccctc
gaccggctggcctcgcggccggtgccggccgaacggctccggcgctgccgcgtcctctac
gtctcgccgatgaaggcgctcgccgtcgacgtcgagcgcaacctgcgcagcccgctcgtc
ggcatccggcacgccgcggcccgcctcggcctgcccgaaccggagaccacggtcgccgta
cggtccggcgacacccccgcggacgagcgccgggcgttcgcccgcaccccgagcgacatc
ctcatcacgaccccggagtcgctcttcctcctgctcacctccgccgcccgggaggccctc
accggggtcgagacggtcgtgctcgacgaggtgcacgccctcgccggcacgaagcggggc
gcccacctcgccctctccctcgagcggctcgacgccctgctgccggccccggcgcagcgg
atcgggctctccgcgacggtgcgccccgtcgaggaggtgggccgcttcctcgccggcggc
cggcccgtcgaggtcgtccagccgccggcggccaaggagtgggacctgcgggtcgtcgtg
cccgtccccgacatgtccgagctcgggcagccgacgggcgacctcgcgggtgccgcggcc
gggcccgagcggcgggcgagcatctggccgcacgtcgaggagcggatcgtcgacctcgtc
gccgagcacacctccaccctggtgttcgccaacagccgccggctcgccgagcggctgacc
tcccggctcaacgagatctggcaggagcggctcgaggcggccgacggcgacgccgccgtc
ggcgccccgggtgccgacccacgtccggccaccctcgccgccgcgccggcccaggtgatg
gcccagtccgggcgcagcgcgggggcggcgccggtgatcgcccgggcccaccacggctcg
gtgagcaaggagcaccggggccagatcgaggaggagctgaagtccggccggctgccggcg
gtcgtcgcgacgagcagcctcgagctcggcatcgacatgggggcggtcgacctcgtcgtg
caggtcgagtccccgccgtcggtggcctccggcctgcagcgggtcggccgggccggtcac
caggtcggggccgtctcccgaggggtgctcttccccaagttccgcggcgacctcgtgcag
accgcggtggtcgtcgagcgcatgctcaccgggtcgatcgaggcgctgcgggtcccgcag
aacccgctcgacgtcctcgcccagcaggtcgtcgccatgtgcgcgctcgaggagtggggc
gtcgaggacctgctcgcgctcgcccgtcgcagcgccccctacgccacgctgacccgcccg
gtgctcgagtccgtcctcgacatgctcgccggccgctacccgagcgaggacttcgccgag
ctgcgtgcccggctcacctgggaccggctctccgacaccctggtcggccgacgcggcgcc
cagcggctcgcggtgacctccggcgggaccatccccgaccgcgggctgtacggggtcttc
ctcgcaaccggtgagggtccgggccggcgggtcggcgagctcgacgaggagatggtctat
gagtcccgggtcggtgacctgttcaccctcggcacgagcacctggcggatcgaggacatc
acccacgaccgggtgctcgtcaccccggcacccgggctgccgggtcggctgccgttctgg
aagggcgactccctcgggcgtcccgccgagctcggccgggccgtcggggagttcgtccgg
gaggtgggcgcgctgtcggacgacgcggcccacgagcgcgtgatggcggcggggctggac
gcctgggcggccgagaacctgctcacctacctgcgcgagcagcgggaggccacggggcac
ctgcccgacgaccgcaccgtggtcgtcgagcgcttccgcgacgagctcggcgactggcgc
atcgcggtccactcccccttcggcgcccaggtccacgccccgtgggcgctcgcgctctcg
gcccggatgcgcgaccggttcggcgtcgacgtccaggcgatgcacggcgacgacggcatc
gtcctgcggctgccggacctggagtgggacgacgtcgagggcctcgaccggcggggcgtg
ggccgcgagctgctcgagctggtgaccctcgaccccgagcaggtgcggggcatcgtcacc
gacgagatcggtggctcggcgctgttcgcctcccgcttccgcgaatgtgccgcccgggcg
ctgctgctgccccgccggcgccccgaccgtcgccagccgctgtggcagcagcgccagcgg
gcctcgcagctgctcgaggtcgccagccgcttccccaccttccccatcgtcctggaggcc
gtgcgcgagtgcgtccaggacgtcttcgacgtgccgggcctgaccgagctgatgcgcgac
gtcgccgcccggcgggtcaccgtggtcgaggtcgagtcggccacgccgtccccgttcgcc
gcctcgctcctgttcggctacgtcgcccagttcctctacgagggagacacccccctcgcc
gagcgccgggccgccgccctcgccctcgacccgggcctgctcgcagagctcctcggcggc
tccgaggggctcgcgctgcgcgacctcctcgacgccgagcaggtcgcccgcaccgaggcc
gagctccagcgcctgacccccgagcgtgccgcacgcgacggcgacgacgtgctcgacctg
ctgcgcgccctcggcccgctgagcgtcgacgccgtgctgcagcgctgccgcgagggggtg
accggcgacgacgtcgaggcgtggctgggcgggctcgaggccgtccggcaggtcatcccc
gtccgggtcgccggcgaggaacggtgggccgcggtcgaggacgcctcccggctgcgcgac
gccctcggtgcctccctcccgccgggggtggcgcagaccttcctcgagccggtcgcggac
ccgctcggcgacctcgtcgcgcgctacgcgcgcacccacgcgccgttccgtcccgcccag
gtcgcgcaggcctacggcctcggcgtggccgtcgtggcccccgccctcgcccgcctcgtc
gcgagcggccgggtggtcgagggcgagctgctgccgaccggcggcggaggcaccgagctc
tgcgacgccgaggtgctgcgcaccctccgccgccgttcgctcgcggcgctgcgggccgag
gtcgagccggtgccgcccgaggcgttcggccgtttcctcgccgagtggcagggggtcggc
ggccggctgcggggtcgcgacggagtcctgcgcgtggtcgagcagctcagcggtgcggtg
ctgcccgcgagcgcggtcgagtccctcgtgctgcccgcccgggtggccgactactccccc
gcgctgctggacgagctcctcgccagcggtgaggtgctctgggccggtcacgggtccctg
cccggtgacgacggctgggtctcgctgcacgtcgccgactcggcccagctcaccctcccc
ggaccggaccccgaccaggtccccgacgaggacggccgggcgctgctcgacgcgctcgcc
gggggcggcgggcacttcttccgtggtctggccgaccgcctggggtccagcgacgacgag
gcgctggccacctcgctgtggggactcgtgtggtccggccgggtcaccggcgacaccttc
gcccccgtccgcgcgctgctcgccggcgggcggacggcgcaccgccgcgcggcgagcggg
ccgcggcgtacccgctacggggggcggcgtggacccctgggcgccctcgggtccgccccc
acccgccccgcgctgcccctgcgctccgggccgccacgcaccaccgggcggtggtccctg
ctgtcgccggtcgaccaggagcccaccctgcgcgcgctcgccacggccgagctgctgctc
gaccggtacggcgtggtgacgcgcggggccgtcgccgccgaggacgtccccggggggttc
gccggggtgtaccgggtctacggccgggcggaggagagcggccgggtgcgccgcggctac
ttcgtcgaggggctgggcgcctcgcagttcggcacgtcgggcgccatcgaccggctccgg
gccggcggccaccaccggggcggtgccgacgccgtcgtgctcgccgcgagcgacccggcc
aacccctacggcgccgccctcccgtggcccgagcgcgtcctcgacaccgcgcccgaggac
gcacccgagggccgccgtcggcgccaccaggcggggcgcaaggccggtgcggtcgtcgtg
ctcgtcggtggcctgctggccctctacgtcgagcggggcggccgcacgctgctcacctac
agcgacgacgtcgaggtgctcacggtggccgcgacggctctcggcgcggcggtgcgccag
gggcatctcgggcgggtcaccgtcgagcgggccgacggtgaccggctgctcggctcggac
cacccggtggcggccgcgctcgaggcggccggcttccacctcaccccgcgtggcctgcgg
atgcggcggtga

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