Phycicoccus endophyticus: H9L10_07295
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Entry
H9L10_07295 CDS
T06776
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
pei
Phycicoccus endophyticus
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H9L10_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pei03021
]
H9L10_07295
Transcription machinery [BR:
pei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9L10_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
QNN50974
UniProt:
A0A7G9R5U9
LinkDB
All DBs
Position
complement(1503784..1505376)
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AA seq
530 aa
AA seq
DB search
MQTLVRQGRTTGSVTGEQVAEAMRAADVRPNRGRVVLRALGEQGIEVRHDDARGVAAAAT
RTAKKSAATASAGGTGKTATTTKTAAKTAKKSSTAKADGQAAPAKKSAASSSTTRKAAAS
AAGGASAAKKATPAKKATTKKATKKATTTPEGEEPPEDLQDEAVDGEDSLEVDGAGTEDS
AATEETAAGEDGEETAAARPTGSDSEDAGFVMSNDDEDAPAQQVVTAGATADPVKDYLKQ
IGKVALLNAEQEVELAKRIEAGLFAEETLNSGEKLDMKLKRELWWIAQDGKKAKNHLLEA
NLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRA
MADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELATELDMTPEKVVEVQKYGR
EPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMR
FGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQALRDYLD
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ctgcagaccctcgtgcggcagggccggaccaccggctcggtgacgggggagcaggtcgcg
gaggcgatgcgggccgccgacgtgcgcccgaaccgcgggcgtgtcgtgctgcgcgcgctc
ggcgagcagggcatcgaggtccggcacgacgacgcccggggggtggcggcggccgcgacc
cgcaccgcgaagaagtccgcggccacggcctcggcgggcggcacgggcaagaccgcgacc
acgaccaagaccgcggccaagaccgcgaagaagtcctccaccgcgaaggccgacggccag
gcggcgcccgcgaagaagtccgcggcctcctcctcgaccacccgcaaggccgccgccagc
gcggccggcggggcctcggcggcgaagaaggccacccccgcgaagaaggccacgacgaag
aaggcgacgaagaaggccacgacgacgcccgagggcgaggagccgccggaggacctgcag
gacgaggcggtcgacggcgaggactccctcgaggtcgacggcgccggtaccgaggactcc
gcggccacggaggagaccgccgcgggcgaggacggcgaggagaccgccgcggcccgcccc
accgggtcggactccgaggacgccgggttcgtcatgagcaacgacgacgaggacgccccg
gcccagcaggtcgtcaccgccggcgcgaccgcggaccccgtcaaggactacctcaagcag
atcggcaaggtggccctgctcaacgccgagcaggaggtcgagctcgccaagcggatcgag
gccgggctgttcgccgaggagacgctcaactccggcgagaagctcgacatgaagctcaag
cgtgagctgtggtggatcgcccaggacggcaagaaggccaagaaccacctgctcgaggcc
aacctgcgcctcgtcgtcagcctcgccaagcgctacaccggccgcggcatgctcttcctc
gacctcatccaggagggcaacctcggcctcatccgggcggtcgagaagttcgactacacc
aagggctacaagttctccacgtacgcgacgtggtggatccgccaggccatcacccgcgcg
atggccgaccaggcccgcaccatccgcatcccggtccacatggtcgaggtcatcaacaag
ctcgcccgcgtgcagcgccagatgctccaggacctcgggcgcgagccgaccccggaggag
ctggcgaccgagctcgacatgacgccggagaaggtcgtcgaggtccagaagtacgggcgt
gagccgatctcgctgcacaccccgctcggcgaggacggcgacagcgagttcggcgacctc
atcgaggactccgaggcggtcgtccccgcggacgcggtgagcttcaccctcctgcaggag
cagctgcacagcgtcctggacaccctctcggagcgggaggccggcgtggtctcgatgcgc
ttcggcctgaccgacggccagccgaagacgctcgacgagatcggcaaggtctacggcgtc
acccgcgagcggatccgccagatcgagtccaagacgatgtccaagctgcgccacccgagc
cgcagccaggcgctgcgcgactacctggactga
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