KEGG   Phycicoccus endophyticus: H9L10_07295
Entry
H9L10_07295       CDS       T06776                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
pei  Phycicoccus endophyticus
Brite
KEGG Orthology (KO) [BR:pei00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    H9L10_07295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pei03021]
    H9L10_07295
Transcription machinery [BR:pei03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H9L10_07295
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 CDC27
Other DBs
NCBI-ProteinID: QNN50974
UniProt: A0A7G9R5U9
LinkDB
Position
complement(1503784..1505376)
AA seq 530 aa
MQTLVRQGRTTGSVTGEQVAEAMRAADVRPNRGRVVLRALGEQGIEVRHDDARGVAAAAT
RTAKKSAATASAGGTGKTATTTKTAAKTAKKSSTAKADGQAAPAKKSAASSSTTRKAAAS
AAGGASAAKKATPAKKATTKKATKKATTTPEGEEPPEDLQDEAVDGEDSLEVDGAGTEDS
AATEETAAGEDGEETAAARPTGSDSEDAGFVMSNDDEDAPAQQVVTAGATADPVKDYLKQ
IGKVALLNAEQEVELAKRIEAGLFAEETLNSGEKLDMKLKRELWWIAQDGKKAKNHLLEA
NLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRA
MADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELATELDMTPEKVVEVQKYGR
EPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMR
FGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQALRDYLD
NT seq 1593 nt   +upstreamnt  +downstreamnt
ctgcagaccctcgtgcggcagggccggaccaccggctcggtgacgggggagcaggtcgcg
gaggcgatgcgggccgccgacgtgcgcccgaaccgcgggcgtgtcgtgctgcgcgcgctc
ggcgagcagggcatcgaggtccggcacgacgacgcccggggggtggcggcggccgcgacc
cgcaccgcgaagaagtccgcggccacggcctcggcgggcggcacgggcaagaccgcgacc
acgaccaagaccgcggccaagaccgcgaagaagtcctccaccgcgaaggccgacggccag
gcggcgcccgcgaagaagtccgcggcctcctcctcgaccacccgcaaggccgccgccagc
gcggccggcggggcctcggcggcgaagaaggccacccccgcgaagaaggccacgacgaag
aaggcgacgaagaaggccacgacgacgcccgagggcgaggagccgccggaggacctgcag
gacgaggcggtcgacggcgaggactccctcgaggtcgacggcgccggtaccgaggactcc
gcggccacggaggagaccgccgcgggcgaggacggcgaggagaccgccgcggcccgcccc
accgggtcggactccgaggacgccgggttcgtcatgagcaacgacgacgaggacgccccg
gcccagcaggtcgtcaccgccggcgcgaccgcggaccccgtcaaggactacctcaagcag
atcggcaaggtggccctgctcaacgccgagcaggaggtcgagctcgccaagcggatcgag
gccgggctgttcgccgaggagacgctcaactccggcgagaagctcgacatgaagctcaag
cgtgagctgtggtggatcgcccaggacggcaagaaggccaagaaccacctgctcgaggcc
aacctgcgcctcgtcgtcagcctcgccaagcgctacaccggccgcggcatgctcttcctc
gacctcatccaggagggcaacctcggcctcatccgggcggtcgagaagttcgactacacc
aagggctacaagttctccacgtacgcgacgtggtggatccgccaggccatcacccgcgcg
atggccgaccaggcccgcaccatccgcatcccggtccacatggtcgaggtcatcaacaag
ctcgcccgcgtgcagcgccagatgctccaggacctcgggcgcgagccgaccccggaggag
ctggcgaccgagctcgacatgacgccggagaaggtcgtcgaggtccagaagtacgggcgt
gagccgatctcgctgcacaccccgctcggcgaggacggcgacagcgagttcggcgacctc
atcgaggactccgaggcggtcgtccccgcggacgcggtgagcttcaccctcctgcaggag
cagctgcacagcgtcctggacaccctctcggagcgggaggccggcgtggtctcgatgcgc
ttcggcctgaccgacggccagccgaagacgctcgacgagatcggcaaggtctacggcgtc
acccgcgagcggatccgccagatcgagtccaagacgatgtccaagctgcgccacccgagc
cgcagccaggcgctgcgcgactacctggactga

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