KEGG   Phycicoccus endophyticus: H9L10_09235
Entry
H9L10_09235       CDS       T06776                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pei  Phycicoccus endophyticus
Pathway
pei03420  Nucleotide excision repair
pei03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    H9L10_09235
   03430 Mismatch repair
    H9L10_09235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pei03400]
    H9L10_09235
Enzymes [BR:pei01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H9L10_09235
DNA repair and recombination proteins [BR:pei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H9L10_09235
   MMR (mismatch excision repair)
    Other MMR factors
     H9L10_09235
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 Rad26-like_C DEAD
Other DBs
NCBI-ProteinID: QNN48512
UniProt: A0A7G9QYT7
LinkDB
Position
complement(1919969..1923229)
AA seq 1086 aa
MSTSVPPPRWSAAELARALGQPHAPTPEQAAVIEAPLRPLLVVAGAGSGKTETMAARVVW
LVANDLVSPEEVLGLTFTRKAAGELSERLAARLATLREAGLWSPPAGPDGAVVLGDTPTV
STYHAYAGRIVREHGLRLGVEPESRLLTEAAAWQFAHEAVVAWDGPMDGVDKAESTVTTA
VVDLAAEMAEHLVTPDELAEHLAAVVAALEALTAPEGSRKRANPMRASVDALRQRAAVVP
LVEAYHALKRSRDAMDFADQVALAARLAAEVPQVGAAERHRFRAVFLDEFQDTSEAQLQL
LRALFAAPGEPVPVTAVGDPHQSIYGWRGASSTTLDRFRSDFGDPHPAPVLPLSTSWRND
RAVLTAANTLAAPLAARARVPVTPLRERPGAGPGHVATARLETLEDEARHVVEWVRTRMG
RPGRRTAAVLCRKRSQFEPVVDALEAAGTPYEVVGLGGLLHTPEVADLLALLHVVADPTR
GDRLMRLLTGPACRLGAADLDGLGAWARHRQGERRRGADLARDASEEASIVEALDELPPP
TWAGSEGQRVSPPALTRLAGLGATVRRLRAVGGIGLPELVHEAEVALGLDIEVLARPGYT
PGAARAHLDAFADVAATFAASADRPGLGGFLAWLEAAVDEERGLDLGWVEARPDAVQVMT
VHAAKGLEWDVVAVPGLVESAFPAHSGSTSRPAGPTWTHSTPTDRAWLSGLAGLPYDLRG
DRAGLPRFGWADPLDWESAAGALEAFTSAAAEHGLAEERRLAYVATTRARLDLLLTAHVW
GSAATPRVTSRFLEEVTSSAGPGAAPGPWVDLPATDPPPSNPRTAQATAVAWPTPDHLAR
RERLLGPARAVHEAAQAGPDDACGDAPWDAEVAMLLTERQAGTGPADVLLPAHLSTSALV
ALAEDAEGFTNALRRPMPQPPALAARRGTAFHAWVEQHYASAAIVDVDALPGSADEDAGE
DLEALRCAFLGSEWADRTPVEVETSVETVLDGVAVRGRIDAVFEQPGEDGEPVWTVVDWK
TGAPPSGARAAARAVQLGAYRLAWARLRGVDPARVRGAFFHAATGETSWPPLPDEAELSR
VLGAAR
NT seq 3261 nt   +upstreamnt  +downstreamnt
gtgagcacgtccgtcccgccgccccggtggtcggccgccgagctggcccgggcgctcggc
cagccccacgcgccgaccccggagcaggcggccgtcatcgaggccccgctgcggccgctc
ctcgtcgtcgccggtgccgggtcgggcaagaccgagacgatggccgcacgggtcgtgtgg
ctcgtggccaacgacctcgtgagccccgaggaggtcctcgggctgaccttcacccgcaag
gccgccggcgagctgtccgagcgactggcggcacggctcgccacgctgcgcgaggcgggg
ttgtggtccccgcccgcggggccggacggtgccgtggtgctcggcgacacccccacggtc
tccacctaccacgcctacgccgggcgcatcgtgcgcgagcacgggctgcgcctcggggtc
gagccggagagccggctgctcaccgaggcggcggcctggcagttcgcgcacgaggcggtg
gtcgcctgggacgggccgatggacggggtcgacaaggcggagtcgacggtgacgaccgcc
gtcgtcgacctcgccgcggagatggccgagcacctggtcaccccggacgagctcgccgag
cacctcgcggcggtcgtcgccgcactcgaggccctcaccgctcccgagggatcccgcaag
cgggccaacccgatgcgcgcgagcgtcgacgccctccgccagcgggccgcggtcgtcccg
ctcgtcgaggcctaccacgcgctcaagcgctcccgagacgcgatggacttcgccgaccag
gtcgcgctcgccgcccggctcgccgccgaggtgccgcaggtgggggcggccgagcggcac
cggttccgggcggtcttcctcgacgagttccaggacacctccgaggcgcagctgcagctg
ctgcgcgcgctcttcgccgcgccgggggagccggtgccggtgaccgcggtcggcgacccg
caccagtcgatctacggctggcgcggcgcctcctcgacgacgctcgaccggttccgctcc
gacttcggcgacccccacccggcaccggtgctgcccctgtcgacgagctggcgcaacgac
cgtgcggtcctcacggccgccaacaccctcgccgccccgctcgccgcccgggcccgcgtc
cccgtcacacccctgcgcgagcggccgggtgccgggccggggcacgtcgcgaccgcgcgg
ctggagaccctcgaggacgaggcgcgtcacgtcgtcgagtgggtccgcacccggatgggc
cgccccgggcgccgcacggccgcggtgctgtgccgcaagcgctcccagttcgagccggtc
gtcgacgcgctcgaggctgccgggacgccctacgaggtcgtcggcctcggcggcctgctg
cacaccccggaggtggccgacctcctcgccctcctgcacgtcgtggccgaccccacccgc
ggcgaccgcctcatgcggctgctcaccggccccgcgtgccggctcggcgctgccgacctc
gacgggctcggcgcctgggcccgccaccgtcagggcgagcgacggcgtggcgccgacctc
gcacgcgacgcgagcgaggaggcgagcatcgtcgaggcgctcgacgagctgccgccgccg
acctgggccggcagcgagggacagcgggtctccccgcccgccctcacccggctcgccggg
ctcggtgccaccgtgcgccggttgcgggcggtcgggggcatcggcctgcccgagctcgtc
cacgaggccgaggtcgcgctcggcctggacatcgaggtcctcgcccggcccgggtacacc
cccggtgccgcccgggcccacctcgacgcgttcgccgacgtcgccgccaccttcgccgcg
agcgcggaccgccccggcctcggggggttcctcgcgtggctcgaggccgcggtcgacgag
gagcggggtctcgacctcggctgggtcgaggcccgcccggacgccgtgcaggtgatgacc
gtgcacgccgccaagggcctggagtgggacgtcgtcgcggttcccggtctcgtggagtcg
gccttccccgcccactcgggctcgacgagccggccggccggcccgacgtggacccactcc
acgcccaccgaccgtgcctggctgagcgggctggccgggctgccgtacgacctgcgcggc
gaccgcgccgggctgccccggttcgggtgggccgacccgctcgactgggagagcgccgcc
ggcgccctcgaggcgttcacgagcgcggccgccgagcacggcttggccgaggagcgccgg
ctggcctacgtcgcgaccacccgggcccggctcgacctcctgctcacggcgcacgtgtgg
ggcagcgccgccaccccccgggtgacctcccggttcctcgaggaggtgacctcctccgcc
gggccgggtgcggccccgggcccctgggtcgacctgcccgccacggacccgccaccgagc
aacccccgcaccgcccaggccaccgcggtggcctggccgaccccggaccacctcgcccgc
cgcgaacggctcctcggcccggcccgtgcggtgcacgaggccgcgcaggccggccccgac
gacgcctgcggtgacgcgccgtgggacgccgaggtggcgatgctcctgacggagcggcag
gcgggcaccggcccggccgacgtcctcctcccggcgcacctgtcgacctcggcgctcgtc
gccctcgccgaggacgcggagggcttcacgaacgccctgcggcgcccgatgccccagccc
ccggcgctggccgcccgccgcgggacggccttccacgcctgggtcgagcagcactacgcg
agcgccgcgatcgtcgacgtcgacgccctgcccggctcggccgacgaggacgccggcgag
gacctcgaggcgctgcgctgcgccttcctcggctcggagtgggccgaccgcacgccggtc
gaggtcgagacgagcgtcgagaccgtcctcgacggcgtcgccgtccggggccgcatcgac
gcggtgttcgagcagccgggggaggacggcgagccggtctggaccgtggtcgactggaag
accggcgccccgccgagcggggcccgggcggcggctcgagcggtccagctcggggcctac
cggctggcctgggcacggctgcgcggcgtggacccggctcgggtgcgcggggcgttcttc
cacgccgcgaccggcgagaccagctggccgcctctgccggacgaggccgagctcagccga
gtcctcggcgcggctcgctga

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