Phycicoccus endophyticus: H9L10_11225
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Entry
H9L10_11225 CDS
T06776
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pei
Phycicoccus endophyticus
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pei03032
]
H9L10_11225 (topA)
03400 DNA repair and recombination proteins [BR:
pei03400
]
H9L10_11225 (topA)
Enzymes [BR:
pei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9L10_11225 (topA)
DNA replication proteins [BR:
pei03032
]
Prokaryotic type
DNA Topoisomerases
H9L10_11225 (topA)
DNA repair and recombination proteins [BR:
pei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9L10_11225 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QNN48849
UniProt:
A0A7G9QZS4
LinkDB
All DBs
Position
complement(2338871..2341597)
Genome browser
AA seq
908 aa
AA seq
DB search
MATGRKLVIVESPAKAKTIAGYLGQEWDVEASVGHIRDIPTPSEMPAEVKKGPFGRFGVN
IEDDFDPYYVVDADKKKKVRELKALLKNADELYLATDEDREGEAIAWHLFETLQPKVPVK
RMVFHEITREAIQRAANQTRDIDVSLVDAQETRRILDRLYGYEVSPVLWRKVKAGLSAGR
VQSVATRMVVERERERMAFVRAAYWDVDADVTPGADEDLFTARLTGVDGKRVATGRDFAD
DGTLKGERTVQLDQERATGIAEALRRAEVTVAEVSEKPYTRRPSAPFTTSTLQQEASRKL
RLNSRNAMRVAQRLYENGYITYMRTDSTTLSDAALSAARQQARELYGGDSVPESPRRYER
KVKNAQEAHEAIRPAGDRFRTPKQVEGELRGDEYRLYELIWMRTVASQMADARGSTASLR
LAATLPDGAPAREVELSASGTVITFRGFLAAYEEGRDAPRAGDDEERRLPRLGAGRSLQV
RRAEAAGHETSPPARYTEATLVKAMEERGIGRPSTYASTIGTIQDRGYVSTRGSALVPSW
LAFAVTRLMEEHFGRLVDYDFTASMEEDLDAIARGDEQRAAWLRRFYFGDEASSAEGLRA
LVEDLGEIDARAISTIDIGDGVVVRVGRYGPYVEEVVPAGVDAATGEVTDGAAAQSARTQ
PRRATIADDIAPDEMTPALARELLERAADDGRVLGQDPSTGRDIVAKSGRYGPYVTEVVP
EEEQGKGKNKVKPRTASLFKDMDLGTIELDTALRLLSLPRVVGTDPESGEEITAQNGRYG
PYLKKGTDSRSLTSEQQLFDITLEEALAIYAQPKQRGRAAAKPPLAELGTDPVSGRPVVV
KDGRFGPYVTDGETNATLRRDDDPESLSPERGFELLAEKRAKGPAKKTARKRTTKTAKKT
AKKTAEKA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggacgcaagctcgtcatcgtcgagtcgcccgcgaaggcgaagaccatcgcg
ggctacctcggccaggagtgggacgtcgaggcgtccgtcgggcacatccgcgacatcccg
accccgagcgagatgcccgccgaggtcaagaagggccccttcggccggttcggcgtcaac
atcgaggacgacttcgacccgtactacgtcgtcgacgccgacaagaagaagaaggtccgc
gagctcaaggccctcctgaagaacgccgacgagctctacctcgccacggatgaggaccgc
gagggcgaggccatcgcctggcacctgttcgagacgctgcagccgaaggtgccggtcaag
cggatggtcttccacgagatcacccgcgaggcgatccagcgcgcggccaaccagacccgc
gacatcgacgtctcgctcgtcgacgcccaggagacccggcgcatcctcgaccggctctac
ggctacgaggtcagcccggtcctgtggcgcaaggtcaaggcggggctgtcggcggggcgg
gtgcagtcggtcgcgacccggatggtcgtcgagcgcgagcgcgagcggatggccttcgtg
cgggccgcgtactgggacgtcgacgccgacgtcacccccggcgccgacgaggacctcttc
accgcgcggctgaccggcgtcgacggcaagcgggtcgccaccggacgggacttcgccgac
gacggcaccctcaagggggagcggaccgtccagctcgaccaggagcgggccaccggcatc
gccgaggccctgcgacgggccgaggtgaccgtcgcggaggtgtccgagaagccgtacacc
cgccgcccgagtgctccgttcacgacgagcaccctgcagcaggaggcctcgcgcaagctg
cggctgaactcgcgcaacgcgatgcgggtggcccagcggctctacgagaacggctacatc
acctacatgcgcaccgacagcacgacgctctcggacgccgcgctgagcgccgctcgccag
caggcccgcgagctctacggcggcgactcggtgccggagtcgccgcgccgctacgagcgc
aaggtgaagaacgcccaggaggcccacgaggcgatccggccggccggtgaccgcttccgc
accccgaagcaggtcgagggcgagctgcggggcgacgagtaccgcctctacgagctgatc
tggatgcgcaccgtcgcctcccagatggccgacgcccgcggctcgaccgcctcgctgcgg
ctggcggcgacactgcccgacggcgcgccggcccgcgaggtcgagctgtccgcgagcggc
acggtcatcaccttccgcgggttcctcgccgcctacgaggaggggcgcgacgccccccgg
gccggtgacgacgaggagcgccggctgccgaggctcggcgccggccgctccctccaggtc
cggcgtgccgaggcggccggtcacgagacctccccgcccgcgcgctacaccgaggccacg
ctcgtcaaggccatggaggagcgcggcatcggccgtccctcgacctacgcctcgacgatc
gggacgatccaggaccgcggctacgtctcgacccgcggctccgcgctcgtcccgagctgg
ctggccttcgccgtgacccggctcatggaggagcacttcggccggctcgtcgactacgac
ttcaccgcctccatggaggaggacctcgacgccatcgcccgcggggacgagcagcgggcc
gcctggctgcggcggttctacttcggagacgaggcgagctccgccgaggggctgcgcgcg
ctcgtcgaggacctcggcgagatcgacgcccgggcgatctcgacgatcgacatcggtgac
ggggtcgtcgtgcgcgtcgggcgctacgggccgtacgtcgaggaggtcgtgccggccggg
gtcgacgccgcgaccggcgaggtgaccgacggggccgccgcgcagtcggctcggacccag
ccgcgccgggcgacgatcgccgacgacatcgcccccgacgagatgaccccggcgctcgcg
cgcgagctgctcgagcgggcggccgacgacgggcgggtgctcggccaggacccgtcgacg
gggcgggacatcgtcgcgaagtccggccggtacgggccgtacgtcaccgaggtcgtcccc
gaggaggagcagggcaaggggaagaacaaggtcaagccccgcaccgcgtcgctgttcaag
gacatggacctcggcaccatcgagctcgacaccgcgctgcggctgctgtcgctgccgcgc
gtcgtcggcaccgacccggagtccggggaggagatcaccgcacagaacggccgctacggg
ccgtacctgaagaagggcaccgactcgaggtcgctgacgagcgagcagcagctgttcgac
atcacgctcgaggaggcgctcgcgatctacgcccagcccaagcagcgcgggcgcgccgcg
gccaagccgcccctcgccgagctcggcaccgacccggtctccggccggccggtcgtcgtc
aaggacggcaggttcgggccgtacgtcaccgacggcgagacgaacgcgacgctgcgccgg
gacgacgaccccgagtcgctgagcccggagcgtggcttcgagctgctcgccgagaagcgg
gccaaggggccggcgaagaagacggcgcgcaagcggacgacgaagacggccaagaagacg
gcgaagaagaccgcggagaaggcctga
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