KEGG   Phycicoccus endophyticus: H9L10_14130
Entry
H9L10_14130       CDS       T06776                                 
Name
(GenBank) Fpg/Nei family DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pei  Phycicoccus endophyticus
Pathway
pei03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    H9L10_14130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pei03400]
    H9L10_14130
Enzymes [BR:pei01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     H9L10_14130
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     H9L10_14130
DNA repair and recombination proteins [BR:pei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     H9L10_14130
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Zn_ribbon_TFIIB DUF6441 NFACT_N Zn_ribbon_RRN7
Other DBs
NCBI-ProteinID: QNN49325
UniProt: A0A7G9R150
LinkDB
Position
2936397..2937257
AA seq 286 aa
MPELPEVQALADFLRQRTDGLVVTGVELGSFHVLKTFTPPPEALVGAPVDGVARHGKFLD
LDCGGTHLVVHLARAGWLRWSDAMPSTVLRPGKSPIALRVRFDDASGFDLTEAGTQKRLA
AYVVHRPEDVPGVASLGPDPLADGFTEEVFAGIVGAHRMQVKGLLRDQSVIAGVGNAYSD
EILHVAKLSPFAIAASLDDAQVTRLYAALRETLARAVAAASGKPAKELKDAKRAGMRVHG
RTGEPCPECGDVVREVSFADSSLQYCATCQTGGKPLADRRTSKFLK
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcccgagctgcccgaggtgcaggcgctggcggacttcctccggcagcgcacggatggg
ctcgtcgtcaccggggtcgagctcgggtccttccacgtgctcaagaccttcaccccgcca
ccggaggcgctcgtcggcgcccccgtcgacggggtcgcacgccatggcaagttcctcgac
ctcgactgcggcgggacccatctcgtcgtccacctcgcccgcgcggggtggctgcgctgg
tccgacgcgatgccgagcacggtgctgcggccggggaagtcaccgatcgcgctgcgggtg
cgcttcgacgacgcgtcgggcttcgacctcaccgaggcggggacgcagaagcggctggcc
gcgtacgtcgtccaccgccccgaggacgtcccgggggtcgcctcgctcggccccgacccg
ctcgccgacggcttcaccgaggaggtgttcgccggcatcgtcggggcgcaccggatgcag
gtcaaggggctgctgcgcgaccagtcggtcatcgccggggtcggcaacgcctactccgac
gagatcctccacgtcgccaagctctcgcccttcgcgatcgccgcgtcgctggacgacgcc
caggtcacccggctctacgccgcgctgcgcgagaccctcgcgcgggccgtcgccgcggcc
tcgggcaagccggccaaggagctcaaggacgccaagcgggcggggatgcgcgtgcacggt
cgcacgggtgagccgtgccccgagtgcggggacgtcgtgcgggaggtctccttcgccgac
tcctccctccagtactgcgcgacctgccagaccggtggcaagccgctcgccgaccggcgc
acgagcaagttcctcaagtag

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