Phycicoccus endophyticus: H9L10_14130
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Entry
H9L10_14130 CDS
T06776
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pei
Phycicoccus endophyticus
Pathway
pei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L10_14130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pei03400
]
H9L10_14130
Enzymes [BR:
pei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H9L10_14130
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H9L10_14130
DNA repair and recombination proteins [BR:
pei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9L10_14130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
DUF6441
NFACT_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QNN49325
UniProt:
A0A7G9R150
LinkDB
All DBs
Position
2936397..2937257
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AA seq
286 aa
AA seq
DB search
MPELPEVQALADFLRQRTDGLVVTGVELGSFHVLKTFTPPPEALVGAPVDGVARHGKFLD
LDCGGTHLVVHLARAGWLRWSDAMPSTVLRPGKSPIALRVRFDDASGFDLTEAGTQKRLA
AYVVHRPEDVPGVASLGPDPLADGFTEEVFAGIVGAHRMQVKGLLRDQSVIAGVGNAYSD
EILHVAKLSPFAIAASLDDAQVTRLYAALRETLARAVAAASGKPAKELKDAKRAGMRVHG
RTGEPCPECGDVVREVSFADSSLQYCATCQTGGKPLADRRTSKFLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtgcaggcgctggcggacttcctccggcagcgcacggatggg
ctcgtcgtcaccggggtcgagctcgggtccttccacgtgctcaagaccttcaccccgcca
ccggaggcgctcgtcggcgcccccgtcgacggggtcgcacgccatggcaagttcctcgac
ctcgactgcggcgggacccatctcgtcgtccacctcgcccgcgcggggtggctgcgctgg
tccgacgcgatgccgagcacggtgctgcggccggggaagtcaccgatcgcgctgcgggtg
cgcttcgacgacgcgtcgggcttcgacctcaccgaggcggggacgcagaagcggctggcc
gcgtacgtcgtccaccgccccgaggacgtcccgggggtcgcctcgctcggccccgacccg
ctcgccgacggcttcaccgaggaggtgttcgccggcatcgtcggggcgcaccggatgcag
gtcaaggggctgctgcgcgaccagtcggtcatcgccggggtcggcaacgcctactccgac
gagatcctccacgtcgccaagctctcgcccttcgcgatcgccgcgtcgctggacgacgcc
caggtcacccggctctacgccgcgctgcgcgagaccctcgcgcgggccgtcgccgcggcc
tcgggcaagccggccaaggagctcaaggacgccaagcgggcggggatgcgcgtgcacggt
cgcacgggtgagccgtgccccgagtgcggggacgtcgtgcgggaggtctccttcgccgac
tcctccctccagtactgcgcgacctgccagaccggtggcaagccgctcgccgaccggcgc
acgagcaagttcctcaagtag
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integrated database retrieval system