KEGG   Pedobacter aquae: FYC62_01340
Entry
FYC62_01340       CDS       T06312                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pej  Pedobacter aquae
Pathway
pej03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pej00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FYC62_01340 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pej03019]
    FYC62_01340 (rny)
Messenger RNA biogenesis [BR:pej03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FYC62_01340 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B Ribosomal_S18
Other DBs
NCBI-ProteinID: QEK50462
UniProt: A0A5C0VF22
LinkDB
Position
300102..301664
AA seq 520 aa
MEIMIYLAIAIVAFGGGVLTGRVLLRQLLKQQEVAAQSKVKKILKDAENNAEILKKNKLL
EAKEKFLQMKADHEQEINQKNIAISQRENTLKQKEQSLNQKLENQTRKEQELDNLKKKLE
QQTEIVVKKQEEVEAIKNQHIKELETIAGLSAEEAKTQLETNLKEEARTNAMAQIKDIVD
EAKMTAAKEAKKVVIQTIQRTATESAIENTVSIFNIENDEIKGRIIGREGRNIRALEAAT
GIEIIVDDTPEAIILSGFDPVRREIARLALHRLVTDGRIHPARIEEVVAKTQKQIEEEII
EIGERTVIDLGIHGLHPELIRMVGRMRYRSSYGQNLLQHSREVANFCATMASELGLNAKL
AKRAGLLHDIGKVPDDNPELPHAILGMQLAEKYKEHPEVCNAIGAHHDEIEMTSMISPII
QACDAISGARPGARREVVESYIRRLKELESLALSYPGVEKTFAIQAGRELRVVVESEKIS
DAQSEILAADISNRIQTEMTYPGQIKVTVIRETRSVAYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggagataatgatttacctcgctattgcaattgttgcttttggtggaggagttttaaca
ggaagagtactacttcgtcagctgcttaaacagcaagaagtagcagcacagtctaaagta
aagaagattttaaaggatgctgaaaataatgctgaaatcttaaaaaagaataaattatta
gaagctaaagagaaattcttgcaaatgaaagcagatcacgagcaagaaatcaatcaaaaa
aatattgccatttcacaaagagagaacactttaaaacaaaaggaacagtctctcaatcag
aaattagaaaatcaaaccagaaaagagcaagagcttgacaatcttaaaaagaagttagag
caacaaacagaaattgttgttaaaaaacaagaagaggttgaggctatcaaaaatcaacat
atcaaagaattagaaactattgctggtttatctgctgaggaagctaaaacgcaactagaa
actaatttaaaagaagaagccagaaccaatgccatggctcaaattaaagatattgttgat
gaagccaaaatgactgctgctaaagaagctaaaaaagtagttatacaaaccattcaacgt
acagctacagaatctgctatagaaaatactgtgtctattttcaatatcgaaaatgatgaa
attaaaggtagaattataggtagagaaggcagaaatatcagagctttagaagctgcaaca
ggtatagaaattattgttgatgatacgccagaggctattatactttctggttttgaccct
gtaagaagagaaattgcccgtttagcgcttcaccgtttggtaacagacggacgtatacac
ccagccagaattgaagaggtggtagccaaaactcaaaaacaaattgaagaggaaattatt
gagataggcgagcgtaccgtaattgatttaggtatacatggcttacacccagagttgata
agaatggtgggcagaatgcgttaccgctcttcttacggacagaatttgttacaacactct
agagaggtagcaaatttctgcgctaccatggcatcagaacttgggttaaacgctaaactt
gcaaaaagagccggattattacatgacataggtaaagtgcctgatgataacccagaattg
ccacacgcaattttaggtatgcagctagcagaaaaatataaagaacatcctgaagtttgc
aatgctattggtgcacaccatgatgagatagaaatgacttctatgatatctcctattatc
caagcttgcgatgccatttctggtgcaagaccaggtgcaagaagagaggtagtagaaagc
tatatcagaagactaaaagagttagaaagcttagctttatcttaccctggcgtagagaaa
acttttgctatacaagcaggtagagagctaagggtagtggtggaaagtgaaaaaataagt
gatgcgcaatctgaaattttagcagctgatatctctaacagaattcaaactgaaatgact
tatcctggtcaaattaaggttacggttatcagagaaaccagatctgtagcttacgcgaaa
taa

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