Pedobacter aquae: FYC62_01635
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Entry
FYC62_01635 CDS
T06312
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pej
Pedobacter aquae
Pathway
pej03030
DNA replication
pej03430
Mismatch repair
pej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FYC62_01635 (dnaE)
03430 Mismatch repair
FYC62_01635 (dnaE)
03440 Homologous recombination
FYC62_01635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pej03032
]
FYC62_01635 (dnaE)
03400 DNA repair and recombination proteins [BR:
pej03400
]
FYC62_01635 (dnaE)
Enzymes [BR:
pej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FYC62_01635 (dnaE)
DNA replication proteins [BR:
pej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FYC62_01635 (dnaE)
DNA repair and recombination proteins [BR:
pej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FYC62_01635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
P63C
DUF7532
Motif
Other DBs
NCBI-ProteinID:
QEK50511
UniProt:
A0A5C0VFY5
LinkDB
All DBs
Position
complement(354462..358826)
Genome browser
AA seq
1454 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDDMGNLLSNEDYLIKPEGFNIPY
DAEKVHGISTELATEQGLPLADVLVKFNAAIAQAKFIVGQNIKFDLNIMGCEFHRFQIAT
ELNSKPILDTCTEVTASLLQLPGGRGGKFKLPTLTELHQYLFQVPFGEAHNATADVEATT
RCFFELLRKDVFTIQELQADEAYLTQFKTANPEAIRPVGLKHINLKEASEAIRKSTQQQN
DAIQTSSDSFVSLTDVDFVHLHNHTQFSILQSTASVPDLVKAAAKYKMPAVAITDHANMM
GAFHFVSNVLNHNKAAEAKNKAALENGEAPTETIIKPIVGCEFFVCDNHKDKSRKDNGYQ
VVFLAKNKKGYHNLAKMSSIAYTSGFYYVPRIDRQIIEQYKEDIIVLSGNLYGEIPSKVL
NMGENQAEEALIWWKKTFGDDFYIELMRHNQEDENRVNQTLLSLARKHQVKLIATNNTYY
INKEDAHPHDILLCVKDGEKFSTPKGRGRGFRYALPNDEYYFKAADEMKKLFSDVPEAII
NISEVIDKVETYSLYRDVLLPKFDIPEEFLVPEDEADGGKRGENKYLAHLTYVGAAKRYE
EITPEIKERLDFELKTIENTGYPGYFLIVQDFIAKAREMDVSVGPGRGSAAGSAVAYCLG
ITNIDPIAYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVIKKYGASQVAQIITYGT
MAAKSSIRDTARVLDLPLFEADKIAKLIPNLKLNKIFNMDEQALRSALRSEEMENVQQLI
ALANGDDLGAETIKQAQVLEGSLRNTGIHACGVIITPSDITNFVPVATAKDSDLYVTQFD
NSVVESAGLLKMDFLGLKTLTLIKDTVKLVKHRLDIDLDPDTFPIDDLKTYELFQRGETV
GIFQYESSGMQKYMKELKPTVFGDLIAMNALYRPGPLEYIPSFIRRKNGEEEIKYDLDAC
EEYLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQKDVLDKMKPKFVQQAAE
KGHDPKTLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNMND
IKQVTFFMEECKRMGLVVLGPDVNESYYKFTVNDQYAIRFGMGAIKGVGAGAVETIVENR
KTGKYKSIFDFAKRIDLRAANKKALENLVLAGGFDCFENTHRAQYFYDDGDGSSPLEKAI
KYGAKHKENENSSQGSLFGGSSNVEIAEPSLSPCEEWGAMEKLAKEKEVVGIYISGHPLD
EYKLVLNKYCSSGNLTVFNEIEKGADFQFKVGGIVTSIRHMTTKDGRGWGIFKLEGYDDA
YEFTIYRDEYLKFKHHLIVNNYLYIKGNVGYFSNPDGSKRAKISYTDFTDLRDVLEKQST
KIDISVDISEISDDFIHNLNQVISNHSGSKKLSFVILDKKDRLKVDMQSKTKQINICKEL
LSQLDELEVDYVLN
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgataccgaaaccactggattacctaaaagatgggacgcccctatt
accgatacagataactggccgaggtgtattcaaattgcatggcaattgcatgatgatatg
gggaacctcctctctaatgaggattacttaattaaacccgaaggttttaatatcccttac
gatgctgagaaagttcatggtatttctaccgaactagctacagaacaaggtttacctttg
gcagatgttttagtaaaatttaatgcggccattgcacaagctaaatttattgtagggcaa
aacatcaagtttgatttaaacattatgggttgtgagttccaccgctttcaaatagctaca
gaacttaacagtaaacccattttagatacctgtacagaagttaccgctagccttttacaa
ttgcccggtggccgaggtggaaagtttaaactccctaccttaacagaacttcatcaatat
ttatttcaagtaccttttggcgaagcacataatgctacagccgatgttgaagctaccacc
cgatgcttttttgaacttcttagaaaagatgttttcacaatacaagagcttcaggctgat
gaggcttatctaactcagtttaaaactgctaatccagaagctattcgccctgttggttta
aaacatataaacctaaaagaagcttcagaggctattagaaaaagtactcagcagcaaaat
gacgcgatacaaactagcagtgatagttttgttagcttaactgatgttgatttcgtacat
ctgcataaccatacgcaattttctatattacaatctacggcatctgtaccagatttggtt
aaagcagctgctaaatataaaatgcccgctgttgccataacagaccacgccaatatgatg
ggggctttccattttgtgagtaatgttttaaaccacaataaagccgctgaagcaaaaaat
aaagctgccttagaaaatggtgaagcacctacagaaaccatcataaaacctattgtaggt
tgcgagttttttgtttgcgataaccataaagacaaaagcagaaaagacaatggctaccaa
gtggtatttttggctaagaataaaaaaggctatcacaacctagcaaaaatgtcttctatc
gcttataccagcggtttttactatgtacctaggatagatagacaaattatagaacagtat
aaagaagatataattgtactttctggaaacctgtatggcgagataccaagtaaggtttta
aacatgggcgaaaaccaagccgaagaagctttaatatggtggaaaaaaacctttggagat
gatttttatatcgagctgatgcgccacaatcaggaagatgaaaatcgggtaaaccaaact
ttattaagcttggctagaaaacatcaggttaaacttatcgccaccaataacacctattac
atcaataaagaagatgcccatccgcatgatattttattgtgcgttaaggatggcgagaaa
ttttctacaccaaaaggacgcggacgaggtttccgttatgccctaccaaatgacgagtat
tatttcaaagctgccgatgagatgaaaaagctattttcggatgttccggaagctatcatc
aatatctctgaagtgattgataaagtagaaacttactcgctttaccgcgatgttttgctt
cctaaatttgatattccggaagagtttttagtaccagaagacgaagctgatggtggtaaa
agaggtgagaataaataccttgctcatttaacttatgtaggggcagctaaacgttacgag
gaaattactccagaaattaaagagcgtttagattttgagcttaagaccattgaaaatacc
ggttacccgggatatttcttaattgttcaggattttatcgccaaagctagagaaatggat
gtttctgtaggcccaggaaggggttctgcggcgggctcggcagtagcctattgtttaggt
atcaccaacatagaccctattgcttacgatttactttttgagcgtttcttaaatccagat
agggtttccatgcccgatattgatatcgactttgatgatgaaggtcgtggtagagtaatg
gattatgttattaaaaaatatggtgccagccaagtagctcaaatcatcacttatggtact
atggcggcaaaatcgtctatcagagatactgcccgtgtgctagatttaccgctttttgag
gctgataaaattgctaaacttatccctaatctaaagctgaataagattttcaatatggat
gagcaagcgcttaggagtgcgctacgctctgaggagatggaaaacgttcagcaattgatt
gccctagcaaacggagatgatttaggtgcagaaaccataaaacaggcacaagttttagaa
ggttctttaagaaataccggtatacatgcttgcggggttattattacacctagcgatatc
accaactttgttcctgttgctacagccaaagactctgatttatatgttacccaatttgac
aactcggtagtagaaagcgctggtctgttaaaaatggacttcttgggtcttaaaacgctt
acgctgatcaaagataccgttaagctggttaaacataggttggatatagatttagaccct
gatactttccctattgatgatttaaaaacttatgaacttttccaacgtggtgaaacggta
ggtatattccagtacgagtcaagcggaatgcaaaagtacatgaaagagctaaagcctaca
gtttttggtgatttaatagccatgaatgcgctttacagaccgggaccactagagtatatt
ccaagttttatcagaagaaaaaatggtgaggaagaaataaaatacgatttagatgcttgc
gaagagtatctaaaagaaacctatggtattaccgtataccaagagcaggtaatgcttctt
tcgcaaaaacttgcagattttaccaaaggtgaagccgacgttttacgtaaggccatgggt
aaaaagcaaaaagatgttttggataaaatgaaacctaaatttgtgcagcaagcagcagaa
aaaggtcatgatcctaaaacattagaaaaaatatggaaagattgggaagcttttgcaagt
tatgcttttaacaaatctcattctacttgctacgcttggattgcttaccaaactgcatat
ttaaaagcccactaccctgccgagtatatggctgctgtactatcaaacaacatgaatgat
attaagcaagttactttctttatggaagaatgtaaacgtatgggcttggtagttttaggt
cctgatgttaatgaatcttattacaaatttaccgtaaacgaccaatacgccatccgtttt
ggtatgggtgccattaaaggtgttggagctggtgcagtagaaaccattgtagaaaaccgt
aaaacaggcaaatacaaatcaatttttgattttgccaaacgtattgatttaagagctgct
aacaagaaagcgcttgaaaatttggttttagcaggcggatttgattgttttgaaaatact
catagagctcaatatttttatgatgatggtgatggatcatcgccacttgaaaaggctatt
aaatatggtgctaagcataaagagaatgaaaattcttctcaaggaagtttatttggaggc
tctagcaatgtagaaatagcagaacctagcttatctccttgcgaagaatggggcgccatg
gaaaaactggccaaagaaaaggaagtggtaggtatttacatctctggacatcctttagat
gaatataaattggttttaaacaaatattgttctagcggcaaccttaccgtttttaacgaa
attgaaaaaggtgccgatttccaatttaaagttggtggtatcgtaacctctatcagacac
atgaccaccaaagacggcagaggctggggaatttttaaattggaaggatatgatgatgct
tatgaatttaccatttacagagatgaatatctaaaatttaaacaccatttaatcgtaaac
aactacctctatattaaaggtaatgttggctatttttctaacccagatggatctaaaaga
gcaaaaatatcttatacagattttaccgatttaagagatgttctggaaaagcaatcaacc
aaaatagatatcagtgtagatattagtgagataagtgatgattttattcacaatttaaat
caagtgatatcaaaccatagtggttctaaaaaattgagctttgttattttggataaaaaa
gaccgtttgaaagttgatatgcagagcaagaccaaacaaataaacatttgtaaagagctt
ttaagccagcttgatgagttggaagtagattatgttttgaattaa
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integrated database retrieval system
