KEGG   Pedobacter aquae: FYC62_03410
Entry
FYC62_03410       CDS       T06312                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pej  Pedobacter aquae
Pathway
pej03030  DNA replication
pej03430  Mismatch repair
pej03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FYC62_03410
   03430 Mismatch repair
    FYC62_03410
   03440 Homologous recombination
    FYC62_03410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pej03032]
    FYC62_03410
   03400 DNA repair and recombination proteins [BR:pej03400]
    FYC62_03410
Enzymes [BR:pej01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FYC62_03410
DNA replication proteins [BR:pej03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FYC62_03410
DNA repair and recombination proteins [BR:pej03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FYC62_03410
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2
Other DBs
NCBI-ProteinID: QEK50823
UniProt: A0A5C0VG18
LinkDB
Position
735584..736549
AA seq 321 aa
MKLKLKRPLAFFDLEATGVNVASDRIVEISILKAMPDGTELIKTLKINPQMPIPLESSLI
HGIYDEDIKDAPTFKDVAQEIIDFLGDADLAGYNSNKFDIPMLMEEFLRVKAPFDIDNRH
FVDVQNIFHQMEQRTLKAAYKFYCGKDIINAHSAEADIKATYEVLLAQIEKYEGKDWEDR
SGKVSQPVVNDVAALHQFTNLNKPVDFAGRMVFNNDNIPCFNFGKHKGKTVFQVFDEEPS
YYAWMMNGDFPLYTKHRLEKLWSDYKNQKNENRQQQQPKPQQGQQIKAQFNKPVAKAQEP
DLAKPADEDMLKMLASKFKKI
NT seq 966 nt   +upstreamnt  +downstreamnt
atgaaattaaagctaaagcgccccctggcattttttgatttagaggcaacaggagtaaat
gttgcatcagaccgtattgtagaaatctctattctgaaagctatgccagacggtaccgag
ctgattaaaacgcttaaaataaaccctcaaatgcctattcctttagagtctagcttaata
catggtatttatgatgaggatataaaagatgcgccaacgtttaaagatgtagctcaggaa
attatagatttcctaggcgatgccgatttagccggttacaactccaataaatttgatatc
ccgatgttgatggaagagtttttacgagtaaaagctccttttgatattgataataggcat
tttgtagatgtacaaaatatcttccaccagatggaacagcgcaccttaaaagcggcttat
aagttttattgcggaaaagacattatcaatgcgcactctgccgaggctgatataaaagca
acttatgaggttttattagctcaaattgaaaagtatgaggggaaagattgggaagataga
agtggtaaagtatcgcaaccggtagtaaatgacgttgccgctttacaccaatttaccaac
cttaataaacctgtagattttgcaggtagaatggtttttaataacgataatatcccttgt
tttaacttcggtaagcataagggaaaaactgtttttcaggtttttgatgaagaacctagt
tactacgcctggatgatgaacggagattttcctttatacaccaagcatcgtttagaaaaa
ctttggagcgattataaaaaccaaaagaacgaaaacagacagcaacaacagccaaagcca
caacaaggacagcaaataaaagcacagtttaacaagcctgtagctaaagctcaggagcct
gatttggctaaaccagccgatgaagacatgctgaaaatgttagccagcaaattcaaaaaa
atttaa

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