KEGG   Pedobacter aquae: FYC62_04000
Entry
FYC62_04000       CDS       T06312                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pej  Pedobacter aquae
Brite
KEGG Orthology (KO) [BR:pej00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pej02048]
    FYC62_04000
Enzymes [BR:pej01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     FYC62_04000
Prokaryotic defense system [BR:pej02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   FYC62_04000
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII EcoR124_C HSDR_N DEAD UCH
Other DBs
NCBI-ProteinID: QEK50926
UniProt: A0A5C0VEN3
LinkDB
Position
895597..898725
AA seq 1042 aa
MTFTSEAAFEAALIQALSNKGWEKEVLKRPTEKDLLKNWANILFENNRAKDRLNDFPLTE
GEMQQILEQINALRTPLKLNGFINGKTVSIKRDNPDDTLHFGKEVSLKIYDRLEIAAGQS
RYQIAQQPVFPTKSKILNDRRGDLMLLINGMPLIHIELKKNGVSVSQACHQIEKYSRGGV
FSGLFSLVQIFVAMEPKETVYFANPGPDGKFNKDFYFNWADFNNEPINDWSDIASSLLFI
PMAHQLIGFYTVADSNDGVLKVMRSYQYFAANAISDKVAKTDWKSKHALGGFIWHTTGSG
KTMTSFKSAQLIANSQDADKVIFLMDRIELGTQSLKEYRGFANENEDVQATENTGVLVTK
LKSDDPANTLIVTSIQKMSNIKDEDVGLNAHDILLMNKKRIVFIVDECHRSTFGDMLITI
KDTFSSAIFFGFTGTPIQDENQKKLNTTSTVFGDELHRYSIADGIRDKNVLGFDPYKILT
YRDRDLRLAVALEKARANNEVEALADPRKASVFNKYMNRVRMAGHFETSGRYVRGIEDYL
PTAQYDRDEHFEKVVEDILSNWIVLSQNGKFHAIFATSSIADAIHYYCLFKVKNPHLKIT
ALFDPHIDNNGNAAYKEDGLVEIMTDYNERYEQDFRLANHAKFKKDIAARLAHKEPYLRI
ETTPEKQIDLLIVVDQMLTGFDSKWINTLYMDKVLQYENIIQAFSRTNRLFGPDKPFGTI
RYYRMPHTMERNINDAIKLYSGDKPIGLFVEHLDVNLYSMNYVFGEIQNLFITAGIDNFE
RLPDNLSEIGRFAILFKTFNNYLEAAKIQGFNWNKSTYSFGKGKDKVTIQMALNENTYLI
LALRYKELFNTGGGGGGGDVPFEIEGYLTEIDTDKIDSDYMNSRFDKFIKELKKGDVDPT
ELQNTLDELYKSFATLTQEEQKYANLFIRDVQTGVANLESGKTFREYITEYEFNAKNDQI
KIISTLFGLDESKLRLLMSSGLTEANINEYGRFDELKNTVDKYKAKSYFEKVEGNTIPAF
KVNIRVHNLLQKFIIEGGFDIE
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgacatttacatcagaagccgcatttgaagccgcattgatacaagctctttctaataag
ggttgggaaaaagaagttttgaaacgtcctactgaaaaagacttgttgaaaaactgggct
aatatactttttgagaacaacagagccaaagaccgtttaaatgacttcccattgaccgaa
ggggaaatgcaacaaatattggagcagataaatgctttacgaactccattaaaattaaac
ggctttattaatggcaaaacagtttcgataaaaagagataaccctgatgatacattgcac
tttggtaaagaagtaagtttaaaaatttatgaccgattagaaattgcagcagggcaaagc
cgttaccaaattgcccaacaacctgttttcccaaccaagtcaaaaatattaaacgacaga
cgtggcgacttaatgcttttaatcaatggaatgccattgattcatattgaattaaaaaag
aacggagtttcagtaagtcaggcttgccatcaaattgaaaagtattcacgaggcggagtt
ttttcaggcttgttttcactcgttcagatttttgtagcaatggagccaaaagaaacggtt
tatttcgccaaccctggaccagatggcaaattcaataaagacttttatttcaattgggca
gacttcaataatgagcctataaatgattggagtgatattgcttcttcgttattgtttatt
ccaatggctcaccagttaatcggtttctataccgtagcagatagtaacgatggcgttttg
aaagtcatgcggagttatcaatactttgcagccaatgccatatcggataaagtggccaaa
acagattggaaaagcaaacacgctttaggcggtttcatttggcacaccacaggttcgggt
aaaaccatgaccagttttaaatctgcccaactcattgctaattcgcaagatgcagacaag
gtgattttcttaatggataggattgaactcggcacacaatccttgaaagaataccgtggt
ttcgcaaacgaaaatgaagatgtgcaagcaacggaaaatactggcgttttggttacgaaa
cttaaaagtgatgaccctgcaaataccctcattgttacgtctattcaaaaaatgagcaac
atcaaagatgaagatgttggactaaatgctcacgacattctactcatgaacaaaaagaga
attgtttttattgtagatgaatgtcaccgttctactttcggtgatatgcttatcacgatt
aaagatacattctcatctgctatattctttggttttacaggtactccaattcaagatgaa
aatcaaaagaaattaaacactacatccaccgtttttggtgatgaactgcacagatatagc
attgcagatggtattcgagataaaaacgttttgggttttgatccatataaaatccttaca
tatagagaccgtgatttgcgattagctgttgctttggaaaaagcaagagccaacaatgaa
gtagaagcattggcagacccaagaaaagcaagcgtatttaataaatacatgaatagagta
agaatggcagggcattttgaaacttcgggtcgttacgttcggggtattgaagattatttg
ccaactgcgcaatatgaccgtgatgagcattttgaaaaagtagttgaagatattttgagt
aattggattgtgctaagccaaaacggaaaattccacgccatttttgccacaagtagtatt
gctgatgcaatccattattactgtcttttcaaggtaaaaaatccgcacttaaaaatcacc
gcattatttgatccacacattgacaataatgggaatgcagcctacaaagaggacggtctt
gtagaaataatgaccgattacaatgaacgctatgagcaagattttaggttagccaatcat
gccaaattcaaaaaagatattgcggcaagactggcacacaaagagccttatttaagaatt
gaaacaactcccgaaaagcaaattgatttattgattgtagttgaccaaatgcttacaggc
tttgactccaaatggattaatacactttacatggataaagtgcttcaatatgaaaatatc
attcaagcattttcaagaaccaatcgcctttttggacctgataaaccgtttggaacaatt
cgctactatcgaatgccacatacaatggaacgcaacatcaatgatgcgattaaactgtac
tccggcgacaagccaatcggactttttgttgagcatttagatgtcaatctctattcgatg
aattacgttttcggcgaaattcaaaacttattcataacagcaggaattgataatttcgag
agacttcctgataatttatcagaaataggtcgatttgctatactttttaagacgttcaat
aattatttagaagcagcaaaaattcaaggcttcaattggaacaaatcaacctacagtttt
ggaaaaggaaaagataaggtaaccattcaaatggctttgaatgaaaatacctatttgata
ctagcgcttcgttacaaagaactatttaatacaggtggtggcggtggtggcggtgatgtg
ccttttgaaattgaaggttatttgaccgagatagataccgacaaaatagattcagattat
atgaactctcgttttgacaagtttatcaaagaacttaaaaaaggagatgttgacccaaca
gaattacaaaacacgttggacgaattgtataaatcattcgctactctgacacaagaagaa
cagaaatacgcaaacctttttattcgagatgttcaaacaggtgttgcaaatcttgaaagc
ggaaaaacttttagagaatatataacagaatatgagttcaacgcaaagaatgaccaaata
aagataatctcaacactattcggactagatgaatcaaaacttcgattactcatgtcatct
ggcttaacagaagcaaatatcaacgaatacggacgtttcgatgagttgaaaaacacggtt
gacaagtacaaagcaaaatcatattttgaaaaagtagaagggaatactattcctgctttt
aaagtaaatatcagagttcacaatctattacaaaagtttataattgaaggtggttttgat
attgaataa

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