Pedobacter aquae: FYC62_05180
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Entry
FYC62_05180 CDS
T06312
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pej
Pedobacter aquae
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pej03036
]
FYC62_05180 (smc)
Chromosome and associated proteins [BR:
pej03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FYC62_05180 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QEK51133
UniProt:
A0A5C0VGY7
LinkDB
All DBs
Position
complement(1174537..1178073)
Genome browser
AA seq
1178 aa
AA seq
DB search
MQLNKLEIKGFKSFGDKITINFNEGVTAIVGPNGCGKSNVVDAIRWVLGEQSTRMLRSEK
MENIIFNGTKSRKPANLAEVSLTFDNTKNILPTEFSQVTITRKLYRTGESEYRLNDVQCR
LKDITDLFLDTGIGPDSYSIIELKMIDEIITNKENSRRALFEEASGISKYKLRKKQTFNK
LKDTEADLSRVEDLLFEIERNLKTLENQAKKAERYYRLKEQYHALSIVLASFRIIGFRDS
LAQLDEREKEQLEVKQGINTLADQLDADIQKHKFNNLTKEKNLSVQQKATNEFVSKIRAY
ESEKKIKNEQLKFLQDKESKLNDDLEKDKTQLNHVFYNIKRLNEERLQEEQNLQSISTKL
EALKAEVEELRIQQQSSKQGLDQMQNQSNALQNQVYQVEKDIEILNIQKEALDQETRRNI
ADTDSRKIELSNFNKAIADISESLESKKHQLEHLQELEEELKENLASTEAILADNKEQFN
SISRKLDAKQNEYNLTKSMVDNLEGFPESIRFLRKNTQWTKKAPLLSDILFCNEEYRVAI
ENFLEPLMNHYVVEQYSDAIEAIQLLSNSSRGKANFFILNNLEDKEAQELAAPEGAIPVL
SVTETDKKYKKLFNHLLSHVFLVDDSREQDLNAELLNSPMVLIGKSGKFNKSKYTLSGGS
VGLFEGKRIGRAKNLENLHKEIKEAEVQLKKLKDHIEEGTLKVQTLKAATKIQEINTLSA
QINLLQNELISVQTKQEQYQSFIENSQNRKQDIEQKLQHIASELLEKQPLIAELIAQKQI
INEQLIAQQLAFNELSEVLTMRSSAFNAENIKFHQQQNKVSSLDKDLEYRESQQENLENR
INKHSAELEETKLTIKDTLQFVDHDDEDLIAMYNQKEEMEKALQEAEKDYYAVRGLVNDL
ENQLSEIRRKKENTDVLLTEIKDQKNNLKLELNALKERLSVEFNIEIEDLLDTEISEGAE
EQDTREKVDKIKKQLDEFGAINPMAMEAYKEMEERYTFIQAQKKDLSEAKASLLQTIKEI
DDTAKEKFMVAFTHVRENFMRVFRSLFNEEDNCDLILTHPDMPLDSDIDIIARPKGKRPL
SINQLSGGEKTLTATALLFSLYLLKPAPFCIFDEVDAPLDDTNIDKFNNIIRKFSNESQF
IVVSHNKRTIASTDIIYGVTMVEQGVSRVVAVDLREVA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcagttaaacaaattagaaattaagggttttaagagttttggagataagattaccatc
aactttaatgaaggcgtaactgctattgtagggccaaatggttgtggtaaatctaacgtg
gtagatgctatcagatgggttttgggcgagcaaagtaccagaatgctgcgatcagagaaa
atggaaaacatcatcttcaatggcacaaaatccagaaaacctgcaaaccttgctgaagta
tctttaacttttgacaataccaaaaatatcctgccgacagagttttcgcaggtaaccata
acccgtaaactttatcgtactggcgaatcagaatatcgtttaaacgatgtacaatgtagg
ctaaaagatattaccgatttatttttagataccggtattgggccagactcctactctatc
atcgagttaaaaatgatagatgagatcatcaccaataaagaaaactccagaagggcttta
tttgaagaagcatcaggaatatcaaaatataaactccgcaaaaagcaaacttttaataag
ttaaaagatacagaggcagatttaagtcgggttgaagatttacttttcgagattgaaaga
aaccttaaaaccttagaaaatcaggctaaaaaggccgaacgatattatcgattaaaggaa
caatatcatgctttaagcattgtattggcatctttcaggattattggttttagagattcg
ttagctcagctagacgaacgggaaaaagagcaattagaagttaaacaaggtatcaatact
ttagctgatcagttggatgcagacatccagaagcataaatttaataacctcacgaaagag
aaaaacttatccgttcagcaaaaagctactaacgagtttgtaagtaaaattagagcatac
gaaagcgagaaaaagattaaaaacgaacagcttaagtttttacaagacaaagagagtaaa
cttaatgatgatttagagaaagataaaacacaactgaatcacgttttttataatatcaaa
cgcttaaacgaggaaagattacaggaagagcaaaatctgcaaagcatcagcactaaatta
gaggctttaaaagccgaggttgaggaattgcgtatacagcagcaatcatctaaacaaggg
ctagaccaaatgcaaaaccaatctaatgctttgcaaaatcaggtttaccaggtagagaaa
gatattgagattttaaatatccaaaaggaagctttagaccaagaaacacgtagaaatata
gccgatacagactctagaaaaattgaattatctaattttaataaggctatagccgatatt
tctgaaagtttagaaagtaagaaacatcagctagaacatttacaagagctagaagaagag
ttaaaagagaatttagcttctacagaggctattttggccgataataaagaacaatttaac
agtatcagcagaaagctggatgccaaacaaaatgaatataaccttaccaaaagtatggtt
gacaatttggaaggttttccagaatctattcgctttttaagaaagaatacccaatggaca
aaaaaggctccgctactttctgatattcttttttgtaatgaggagtatcgtgtagccata
gaaaattttctagaacctttgatgaaccattatgtagtagagcaatatagcgatgctatt
gaggctatacagcttttaagtaattcttcaagaggaaaggctaacttctttatattaaat
aatttagaagacaaagaagcgcaagaattagcagctcctgaaggtgctatacccgtatta
tctgttacagaaacagataagaaatacaaaaagctattcaaccatttgctaagtcatgtt
tttttagttgatgatagccgagagcaagatttaaacgctgaacttttaaattctcctatg
gtattgataggaaaatcagggaagtttaataaaagtaaatacaccctttcgggaggttcg
gttggtttatttgagggtaaaagaattggtagggctaaaaatcttgaaaacctccataaa
gaaattaaagaggcagaagtacagcttaaaaaacttaaagaccatatagaagaaggcact
ttaaaagtacaaacacttaaagcggctactaaaatacaggagattaataccttatcagct
cagattaatcttctacaaaacgagttgatatcggtgcaaaccaaacaagaacaatatcaa
tcctttatagaaaacagtcagaatagaaaacaggatattgagcaaaagctacaacatata
gcttcagaattgctagaaaaacagcctttaattgccgagttaattgctcaaaagcaaatc
ataaacgagcaattaatagcacaacaattggcctttaacgagcttagcgaggttttaacc
atgcgttcctctgcttttaatgccgagaatatcaaattccaccaacagcaaaataaagtt
agcagtttagataaagatttagagtatagagaatcgcaacaagaaaatctggaaaacaga
atcaataaacacagtgccgagctagaagaaaccaagcttaccattaaagatactttacag
tttgtagaccatgatgatgaagaccttattgccatgtacaaccaaaaagaagaaatggaa
aaagcgcttcaagaagcagaaaaagactattatgcggtacgtggtttggttaacgattta
gaaaatcagctatcagaaatcagaagaaaaaaagaaaacaccgatgttttactaacggag
attaaagaccagaaaaacaacctcaaactagaattaaatgctttaaaagagcgtttatcg
gtagagtttaatatagaaattgaggatttattagataccgaaatctctgaaggagccgaa
gaacaagataccagagaaaaggtagataaaatcaaaaaacaattggatgagtttggtgct
atcaaccccatggctatggaagcctataaagaaatggaagagcgttatacctttatccaa
gctcaaaagaaagatttatcagaagcgaaagcctctcttttacaaaccataaaagagatt
gacgatacagcgaaagagaaattcatggtagcttttactcatgtaagagaaaactttatg
cgtgttttccgctcattatttaatgaagaagataactgcgatttaattcttacccatccg
gatatgcctttagattctgatattgatattattgccagaccaaaaggtaaaagaccattg
tctatcaatcaattatcaggaggtgagaaaaccttaaccgctacagctttattgttttcg
ctatacttattaaaacctgcacccttctgtatttttgatgaggttgatgccccgctagat
gataccaatattgataaattcaacaatatcatacgtaagttttctaacgaatctcagttt
attgtagtttctcataataagcgtaccattgccagtacagatattatttatggcgtaacc
atggtagaacaaggcgtttctagagttgtagcagtagatttaagagaagtagcctaa
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