Pedobacter aquae: FYC62_05335
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Entry
FYC62_05335 CDS
T06312
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pej
Pedobacter aquae
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pej03032
]
FYC62_05335 (gyrA)
03400 DNA repair and recombination proteins [BR:
pej03400
]
FYC62_05335 (gyrA)
Enzymes [BR:
pej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FYC62_05335 (gyrA)
DNA replication proteins [BR:
pej03032
]
Prokaryotic type
DNA Topoisomerases
FYC62_05335 (gyrA)
DNA repair and recombination proteins [BR:
pej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FYC62_05335 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Gp49
Motif
Other DBs
NCBI-ProteinID:
QEK51160
UniProt:
A0A5C0VIY7
LinkDB
All DBs
Position
1215507..1218104
Genome browser
AA seq
865 aa
AA seq
DB search
MAEETDNQNENQHDKIIPINIEEEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGM
LDLGLASNKPYKKSARIVGEVLGKYHPHGDASVYDTMVRMAQPWSLRYPLVDGQGNFGSV
DGDSPAAMRYTEARFKKMAEELLADINKDTIDFRLNFDDSLEEPTVLPSKFPNLLVNGAS
GIAVGMATNMPPHNLSEIVDATAALIDNRDIEISELMKHVKAPDFPTGGFIYGYEGVREA
FETGRGRVMMRGRAEIETFGNERERIIVTEIPYQVNKAMMIERTAELVNEKKIEGISEIR
DESDRDGMRIVYEIKRDSNAAIVLNNLYKYTALQTSFSVNNIALVNGRPMLLNLKDLIRH
FVDHRHEVVIRRTKFELNEAQKRAHILEGLLIALDHLDEVIKLIRSSQTPDDAREGLISQ
FGLTDIQARAILDMTLRRLTGLERDKIKEEYAELMKLIERLQAILNDEGLRMQIIKDELT
EIKEKYGDERRTEIVHSAAELLTEDFIEDEDVVITISREGYIKRTPLTEYRTQGRGGKGS
MGSTSRDEDFIEHIFIASNHNYLLFFTDKGKCYWLRVFEIPEGTRISKGRALQNIINIEK
EEKIRAYIKVVNLKDQDYLENNFIMMCTKKGTIKKTTLQAYSRPRTNGINAININDGDEL
LEANLTTGSSEIIMALRSGRAIRFNESTVRPMGRTATGVRGLRLAHDKDEVVGMISIDSP
EATILVVSEKGYGKRTDLEDYRVTNRGGKGVKTIKVTDKTGELVAIKDVTDKDDLMIINK
SGIVIRIAMSHLRVMGRATQGVRLINLKANDEIASVAKVEHDETAEEDTDAIVTDIEVIE
ADLADEDIDEDDDDAVEDEGEETAE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaaactgataatcaaaacgaaaaccaacacgacaaaattatacctattaat
attgaggaggaaatgaagtcagcatacattgattattcaatgtctgttatcgtttccagg
gctttacctgatgtaagagacggtttaaaaccggttcacagaagggtattatttggtatg
ttagacttaggtttggcaagtaataaaccttataagaaatctgcccgtattgtgggtgag
gtattaggtaagtatcacccacatggtgatgcatctgtttatgataccatggtgcgtatg
gcacagccttggtctttacgctatcctttggtagatgggcaaggtaactttggatctgta
gatggcgattcgcccgctgcgatgcgttataccgaggctcgtttcaaaaaaatggcagaa
gagctattggcagacatcaataaagacaccattgatttccgtctaaattttgacgattcc
ttagaagagcctactgttttaccttccaaattccctaaccttttggttaacggagcatcg
ggtattgctgttggtatggcaacaaatatgcctccacacaatttaagtgaaattgttgat
gctacagccgctttaattgataatagagatatcgagataagtgagctgatgaaacatgtt
aaagctcctgattttcctaccggaggctttatttatggttatgaaggcgtaagagaagct
tttgaaacgggtagaggtagggtgatgatgcgtggtagagcagaaattgaaacttttggt
aacgaaagagagcgtatcattgttacagaaatcccttatcaagtgaataaggcgatgatg
attgagcgtaccgccgagttggttaacgagaagaaaattgaaggtatttctgagatcaga
gatgagtctgatagagatggtatgcgtatcgtttatgaaattaaacgagattctaacgca
gctatcgtacttaacaacctttataaatacacggccttacaaacttcttttagcgttaat
aacattgctttagttaatggccgaccaatgcttttaaatcttaaagatttaataagacat
tttgttgaccacaggcatgaggttgttatcagaagaaccaaatttgagctaaacgaggct
caaaaaagagctcatattttagaaggtttattaattgctttagaccatttagatgaggtt
ataaaattaatcagaagctcgcaaacgccagatgatgcccgtgaaggcttaatcagtcag
tttggtttaacagacattcaggcaagagctatcttagacatgacgctgcgtcgtttaaca
ggtcttgaaagagataagattaaagaggaatatgcggagttgatgaaattaattgagcgt
ttacaagctattttaaatgatgaaggcttaagaatgcaaattattaaggatgaattaacc
gagatcaaagagaaatacggcgacgaaagaagaacagaaattgtacactctgcagctgaa
cttttaacagaagatttcattgaggatgaggatgttgtaatcaccatctcaagagaaggt
tacatcaaaagaactcctttaaccgagtatagaacacaaggaagaggtggtaaaggctct
atgggttcaacctcaagggatgaagattttattgagcatattttcatcgcatctaaccat
aactatttattattctttacagataaaggtaaatgttactggttaagggtatttgaaatt
ccggaaggaacaagaataagcaaaggaagagcacttcaaaacatcatcaatattgaaaaa
gaagaaaagataagagcttacattaaagttgttaatcttaaagaccaagactatctagag
aacaatttcattatgatgtgcaccaagaaaggtaccattaagaaaactacgcttcaagct
tacagtcgcccaagaactaatggtataaatgctatcaatattaatgatggtgatgagcta
ttagaagcaaacttaactacgggttcttcagaaattattatggctttacgttctggtaga
gcaattagatttaatgaatctacggtaagaccaatgggtagaacagctaccggtgtaaga
ggtttaagactagctcatgataaagatgaggtggtaggtatgattagtattgattctcct
gaagcaaccattttagtagtttctgaaaaaggatacggtaaacgtacagatttagaagat
tacagagtaaccaaccgtggtggtaaaggtgttaaaaccattaaagtaactgataaaact
ggcgaacttgtagctattaaagacgttaccgataaagatgatttaatgattatcaataaa
tcaggtatcgttatcagaattgcgatgagccatttaagagttatgggacgagccacacaa
ggggtaaggttgataaatcttaaagctaatgatgagattgcttctgttgctaaagtagag
catgatgaaacagctgaggaagatactgacgcaattgtaacggatattgaagttattgaa
gcagatcttgctgatgaagatatagacgaggatgatgacgatgcagttgaagacgaagga
gaagaaacagcagaataa
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