Pedobacter aquae: FYC62_05525
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Entry
FYC62_05525 CDS
T06312
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pej
Pedobacter aquae
Pathway
pej00300
Lysine biosynthesis
pej00470
D-Amino acid metabolism
pej01100
Metabolic pathways
pej01110
Biosynthesis of secondary metabolites
pej01120
Microbial metabolism in diverse environments
pej01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FYC62_05525 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FYC62_05525 (lysA)
Enzymes [BR:
pej01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FYC62_05525 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEK53241
UniProt:
A0A5C0VP72
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All DBs
Position
complement(1255338..1256519)
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AA seq
393 aa
AA seq
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MFNAQIVDSFKDKETPFYYYDLKLLKNTLTACKEASLPHHFHVHFALKANFNNRVLQVIK
DFGFGADCVSGGEVKKALEIGFDAKQVVFAGVGKSDREINDALDKNIFCFNVESIQELEV
INELAAKKGKKASVAIRVNPNVDAHTHHYITTGLDENKFGINAWELADVSETLKKCSHLE
FLGIHFHVGSQITDMNVFKSLCVKVNEVQSWFEERGMPVKVLNVGGGLGVDYHHPDENNI
ADFNSYFQIFKDFLEIKPYQEVHFELGRALVAQCSSLITSVLYVKHGIKKNFAIVDAGMT
ELMRPALYQAYHKIENISRQLDNSEIKNQESKIINYDVVGPICESSDCFGKEVALPETKR
GDLIALRTAGAYGEVMASAYNLRPDIRHVYNEL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgcccaaatagtagattcatttaaagataaagagactcctttttactattac
gatttaaagttgttgaaaaacactttaacggcttgtaaagaggcttctttaccgcaccat
tttcatgtacattttgctttaaaagccaattttaataaccgtgttttacaggtgattaaa
gattttggctttggtgctgattgcgtttctggtggcgaagttaaaaaagctttagaaata
ggttttgatgctaagcaggttgtatttgcgggtgtaggaaaatcagacagagaaattaac
gatgctttagacaaaaatatcttttgttttaatgtagaatctattcaagaattagaggtt
ataaatgaattagctgctaagaaaggtaaaaaagcctcggttgctattcgtgtaaaccct
aatgtagatgcgcatacccaccattatattactactggtttagatgaaaataaatttggt
attaatgcctgggaacttgctgatgtttcggaaacattaaaaaaatgtagccatttagaa
tttttaggtatacatttccatgtgggttctcaaattacagatatgaatgttttcaaaagc
ctttgtgttaaggttaatgaagttcagtcttggtttgaagagcgtggtatgcctgtaaaa
gttttaaatgttggcggtggtttgggtgtagattatcatcaccctgatgaaaataatata
gcagactttaatagctacttccagatttttaaagattttttagagataaaaccttatcaa
gaagtacattttgaattaggtagggctttagttgcccaatgtagtagcttaattactagt
gttttatatgtaaagcatggtattaaaaagaattttgcgattgtagatgctggtatgaca
gaattaatgcgtccagctttgtatcaggcatatcataaaatagaaaacatttcccgacaa
ttagataattctgaaatcaaaaatcaagaatcaaaaataattaattacgatgttgttggg
ccaatttgcgaatcatctgattgttttggaaaagaagttgctttaccagaaacaaaaaga
ggagacttaatagcattgagaacggcaggcgcttatggcgaggttatggcttctgcttat
aatttgaggccagatatcagacacgtttataacgaattataa
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