Pedobacter aquae: FYC62_05595
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Entry
FYC62_05595 CDS
T06312
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
pej
Pedobacter aquae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_8
AAA
Mg_chelatase
AAA_3
FleQ
AAA_2
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEK51206
UniProt:
A0A5C0VFB9
LinkDB
All DBs
Position
1268622..1270007
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AA seq
461 aa
AA seq
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MAKILIIDDERAIRNTLREILEYEDFEIEDVDNGVDGLDLIKRKNYDLVLCDIKMNRMDG
MEVLSAGLEIRPDLPFIMISGHGTVETAVEASKKGAFDFISKPPDLNRLLITVRNALDRG
SLVTETKVLKQKVSKTKTREILGESPSINKIKETIERVAPTEARVLVTGANGSGKELVAR
WLHEKSNRAQGPMVEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFEQANGGTLFLD
EIGDMSASAQAKVLRALQESKITRVGGEKEIDVNVRVVAATNKDLLKEIEAGNFRMDLYH
RLNVIHIHVPPLVERKSDIPLLSETFCEEICNDYGMPVKKISAGAYEALKNLPWTGNIRE
LRNVIERLIILSDKTITEDDVKAFSNPSGSIYEPETTSKSSGLNFDEFVNFQDYKDYAEK
EYIKFKLEKNNWNVSKTAEDIDIQRSHLYSKIEKFGLKRGE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattttaattattgatgatgaaagagctatcagaaatacgctaagagaaatt
ttagagtatgaagattttgaaattgaagatgtagacaacggcgttgacggtttagactta
attaaaagaaagaattatgatttagttctttgcgatattaagatgaatagaatggatgga
atggaagttctatctgcaggcttagaaataagacctgatttacctttcatcatgatatca
ggacatggaaccgttgaaactgctgttgaagcttctaaaaaaggtgcctttgattttatt
tctaaaccgccagatttaaatcgtttattaattaccgtaagaaatgctttagatagaggt
tctttagttacagaaactaaggtattaaagcaaaaagtaagtaaaaccaaaaccagagaa
attttaggcgaatctccatctatcaataaaattaaagaaaccatagaaagggttgcccct
acagaggcccgtgttttagttactggagccaatggaagtggtaaagaactggtagcaaga
tggctacacgaaaaatctaacagggctcaagggcctatggttgaggtaaactgtgctgct
atcccatcagaattgatagaatcagaattatttggacatgaaaagggttcttttacatca
gctgtaaaacagcgtattggtaagtttgagcaagctaatggtggtacgctatttttagat
gaaattggcgatatgagtgcatcagcgcaagcgaaagttttaagagctttacaagaaagt
aaaattaccagagtaggcggcgaaaaagaaatagatgttaacgtaagagtggttgctgct
accaataaagatttgcttaaagaaattgaagcgggtaattttagaatggacctttaccac
agactaaacgttatccatatccatgtaccgcctttggtagaaagaaaaagtgatattcca
ctattgtctgagaccttttgtgaagaaatttgcaatgattatggaatgcctgttaaaaaa
atatcagccggagcttatgaagcacttaaaaatttaccttggacaggtaacatacgtgag
cttagaaatgtgatagaacgtttaattattttaagcgataaaaccattacagaggatgat
gttaaagctttctccaaccctagtggaagtatttatgagccagaaactaccagtaaatca
tcgggcttaaactttgatgaatttgttaatttccaagactataaagattatgccgagaaa
gagtatatcaaatttaagctagaaaaaaacaattggaacgtttctaaaacagccgaagat
attgatatccaaagaagtcacctttactctaaaattgagaaatttggcctaaaaagaggc
gaataa
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